WormBase Tree Display for Gene: WBGene00020183
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| WBGene00020183 | SMap | S_parent | Sequence | T03D3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T03D3.5 | |||||||
| Molecular_name | T03D3.5 | ||||||||
| T03D3.5.1 | |||||||||
| CE33823 | |||||||||
| Other_name | CELE_T03D3.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | T03D3.5 | ||||||||
| DB_info | Database | AceView | gene | 5D302 | |||||
| WormQTL | gene | WBGene00020183 | |||||||
| WormFlux | gene | WBGene00020183 | |||||||
| NDB | locus_tag | CELE_T03D3.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020183|UniProtKB=O16979 | |||||||
| family | PTHR38620 | ||||||||
| NCBI | gene | 178743 | |||||||
| RefSeq | protein | NM_071364.5 | |||||||
| TREEFAM | TREEFAM_ID | TF322281 | |||||||
| TrEMBL | UniProtAcc | O16979 | |||||||
| UniProt_GCRP | UniProtAcc | O16979 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (132) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (25) | |||||||||
| Paralog | WBGene00008880 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00019244 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in PLML; PLMR; body wall muscle cell; germ line; and head mesodermal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; dpy-10; and pie-1 based on RNA-seq; microarray; and proteomic studies. Is affected by eleven chemicals including 1-methylnicotinamide; stavudine; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T03D3.5 | |||||||
| Corresponding_CDS_history | T03D3.5:wp98 | ||||||||
| Corresponding_transcript | T03D3.5.1 | ||||||||
| Other_sequence | EL888913.1 | ||||||||
| CRC02960_1 | |||||||||
| CR06122 | |||||||||
| MJ04719 | |||||||||
| Associated_feature | WBsf999552 | ||||||||
| WBsf999553 | |||||||||
| WBsf1019326 | |||||||||
| WBsf1019327 | |||||||||
| WBsf1019328 | |||||||||
| WBsf1019329 | |||||||||
| WBsf233444 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00062349 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018062 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035080 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052260 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4068 | ||||||||
| Expr1024976 | |||||||||
| Expr1038777 | |||||||||
| Expr1155891 | |||||||||
| Expr2005770 | |||||||||
| Expr2023985 | |||||||||
| Drives_construct | WBCnstr00025318 | ||||||||
| Construct_product | WBCnstr00025318 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (139) | |||||||||
| Interaction | WBInteraction000405525 | ||||||||
| WBInteraction000416949 | |||||||||
| WBInteraction000555505 | |||||||||
| WBInteraction000574715 | |||||||||
| Map_info | Positive | Positive_clone | T03D3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -12.9911 | |||||||
| Method | Gene |
