WormBase Tree Display for Gene: WBGene00020224
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| WBGene00020224 | SMap | S_parent | Sequence | T05A7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | Sequence_name | T05A7.7 | |||||||
| Molecular_name | T05A7.7 | ||||||||
| T05A7.7.1 | |||||||||
| CE04893 | |||||||||
| Other_name | CELE_T05A7.7 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | T05A7.7 | ||||||||
| DB_info | Database | AceView | gene | 2E970 | |||||
| WormQTL | gene | WBGene00020224 | |||||||
| WormFlux | gene | WBGene00020224 | |||||||
| NDB | locus_tag | CELE_T05A7.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020224|UniProtKB=Q22208 | |||||||
| family | PTHR36519 | ||||||||
| NCBI | gene | 188085 | |||||||
| RefSeq | protein | NM_062428.5 | |||||||
| TREEFAM | TREEFAM_ID | TF322159 | |||||||
| TrEMBL | UniProtAcc | Q22208 | |||||||
| UniProt_GCRP | UniProtAcc | Q22208 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 18 Jan 2005 14:50:06 | WBPerson2970 | Name_change | CGC_name | sre-39 | ||||
| 3 | 16 Jun 2005 10:09:58 | WBPerson2970 | Name_change | CGC_name | erroneous connection to sre-39 removed | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (26) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (28) | |||||||||
| Paralog (11) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalaaaarl; ABalaaaarr; ABplaapaaa; neuronal sheath cell; and neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including eat-2; clk-1; and sek-1 based on tiling array; microarray; and RNA-seq studies. Is affected by nine chemicals including rotenone; Sirolimus; and Rifampin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Growth factor receptor cysteine-rich domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T05A7.7 | |||||||
| Corresponding_transcript | T05A7.7.1 | ||||||||
| Other_sequence | NB11489 | ||||||||
| NBC02616_1 | |||||||||
| Associated_feature | WBsf222941 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00052450 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018188 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035172 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018413 | ||||||||
| Expr1156073 | |||||||||
| Expr2005847 | |||||||||
| Expr2024064 | |||||||||
| Drives_construct | WBCnstr00025284 | ||||||||
| Construct_product | WBCnstr00025284 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (111) | |||||||||
| Interaction (21) | |||||||||
| Map_info | Positive | Positive_clone | T05A7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -3.65174 | |||||||
| Remark | Erroneous connection to sre-39 removed. sre-39 is now connected to WBGene00017371 | Curator_confirmed | WBPerson2970 | ||||||
| Method | Gene |
