WormBase Tree Display for Gene: WBGene00020274
expand all nodes | collapse all nodes | view schema
| WBGene00020274 | SMap | S_parent | Sequence | T05H4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T05H4.11 | |||||||
| Molecular_name | T05H4.11a | ||||||||
| T05H4.11a.1 | |||||||||
| CE27440 | |||||||||
| T05H4.11b | |||||||||
| CE53067 | |||||||||
| T05H4.11a.2 | |||||||||
| T05H4.11b.1 | |||||||||
| T05H4.11b.2 | |||||||||
| Other_name | CELE_T05H4.11 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | T05H4.11 | ||||||||
| DB_info | Database | AceView | gene | 5G904 | |||||
| WormQTL | gene | WBGene00020274 | |||||||
| WormFlux | gene | WBGene00020274 | |||||||
| NDB | locus_tag | CELE_T05H4.11 | |||||||
| NCBI | gene | 179024 | |||||||
| RefSeq | protein | NM_001373038.2 | |||||||
| NM_072231.8 | |||||||||
| TrEMBL | UniProtAcc | A0A486WXD0 | |||||||
| O16516 | |||||||||
| UniProt_GCRP | UniProtAcc | O16516 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (81) | |||||||||
| Strain | WBStrain00037564 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP5108 | ||||||||
| Ortholog (15) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalapaaaa; ABalappaap; cephalic sheath cell; ciliated neurons; and germ line based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; skn-1; and gld-1 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including rotenone; Zidovudine; and bisphenol A based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T05H4.11a | |||||||
| T05H4.11b | |||||||||
| Corresponding_transcript | T05H4.11a.1 | ||||||||
| T05H4.11a.2 | |||||||||
| T05H4.11b.1 | |||||||||
| T05H4.11b.2 | |||||||||
| Other_sequence | CR00559 | ||||||||
| CSC00358_1 | |||||||||
| FD514580.1 | |||||||||
| CRC02992_1 | |||||||||
| Associated_feature (14) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00018259 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00062356 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052584 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00085380 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035238 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052583 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010583 | ||||||||
| Expr1038828 | |||||||||
| Expr1156198 | |||||||||
| Expr2005906 | |||||||||
| Expr2024122 | |||||||||
| Drives_construct | WBCnstr00025247 | ||||||||
| Construct_product | WBCnstr00025247 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (135) | |||||||||
| Interaction | WBInteraction000198844 | ||||||||
| WBInteraction000393347 | |||||||||
| WBInteraction000404664 | |||||||||
| WBInteraction000407694 | |||||||||
| WBInteraction000410750 | |||||||||
| WBInteraction000416265 | |||||||||
| WBInteraction000448304 | |||||||||
| WBInteraction000504312 | |||||||||
| WBInteraction000522872 | |||||||||
| Map_info | Positive | Positive_clone | T05H4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -0.179198 | |||||||
| Reference | WBPaper00033469 | ||||||||
| WBPaper00041771 | |||||||||
| Method | Gene |
