WormBase Tree Display for Gene: WBGene00020342
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| WBGene00020342 | SMap | S_parent | Sequence | T08B1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-201 | Person_evidence | WBPerson655 | |||||
| Sequence_name | T08B1.5 | ||||||||
| Molecular_name | T08B1.5 | ||||||||
| T08B1.5.1 | |||||||||
| CE35762 | |||||||||
| Other_name | CELE_T08B1.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | fbxa-201 | ||||||||
| DB_info | Database | AceView | gene | 5C453 | |||||
| WormQTL | gene | WBGene00020342 | |||||||
| WormFlux | gene | WBGene00020342 | |||||||
| NDB | locus_tag | CELE_T08B1.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020342|UniProtKB=O44559 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 188270 | |||||||
| RefSeq | protein | NM_071140.6 | |||||||
| TrEMBL | UniProtAcc | O44559 | |||||||
| UniProt_GCRP | UniProtAcc | O44559 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 01 Mar 2007 11:55:19 | WBPerson2970 | Name_change | CGC_name | fbxa-201 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (47) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrIII_pilon.g9192 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| chrII_pilon.g6463 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (211) | |||||||||
| Structured_description | Automated_description | Enriched in ABalpapaap; ABarappaap; and in male based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and sir-2.1 based on RNA-seq and microarray studies. Is affected by seven chemicals including Tunicamycin; antimycin; and glycine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Mos1 transposase, HTH domain and HTH domain in Mos1 transposase. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T08B1.5 | |||||||
| Corresponding_CDS_history | T08B1.5:wp109 | ||||||||
| Corresponding_transcript | T08B1.5.1 | ||||||||
| Associated_feature | WBsf999426 | ||||||||
| WBsf999427 | |||||||||
| WBsf1019241 | |||||||||
| WBsf1019242 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052834 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035338 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018427 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022868 | ||||||||
| Expr1156437 | |||||||||
| Expr2011515 | |||||||||
| Expr2029752 | |||||||||
| Drives_construct | WBCnstr00025207 | ||||||||
| Construct_product | WBCnstr00025207 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (67) | |||||||||
| Interaction (44) | |||||||||
| Map_info | Map | V | Position | -16.5682 | Error | 0.023145 | |||
| Positive | Positive_clone | T08B1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
