WormBase Tree Display for Gene: WBGene00020372
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| WBGene00020372 | SMap | S_parent | Sequence | T09A12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T09A12.1 | |||||||
| Molecular_name | T09A12.1 | ||||||||
| T09A12.1.1 | |||||||||
| CE35002 | |||||||||
| Other_name | T09A12.e | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_T09A12.1 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | T09A12.1 | ||||||||
| DB_info | Database | AceView | gene | 4J13 | |||||
| WormQTL | gene | WBGene00020372 | |||||||
| WormFlux | gene | WBGene00020372 | |||||||
| NDB | locus_tag | CELE_T09A12.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020372|UniProtKB=O61221 | |||||||
| family | PTHR38631 | ||||||||
| NCBI | gene | 188312 | |||||||
| RefSeq | protein | NM_068982.5 | |||||||
| TREEFAM | TREEFAM_ID | TF319599 | |||||||
| TrEMBL | UniProtAcc | O61221 | |||||||
| UniProt_GCRP | UniProtAcc | O61221 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (28) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (19) | |||||||||
| Paralog | WBGene00007641 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00011425 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00018001 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00044769 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| Structured_description | Automated_description | Enriched in several structures, including ABplaapapa; ABpraapapa; MSaaaaapa; MSaapaapa; and pharyngeal gland cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by twelve chemicals including methylmercuric chloride; manganese chloride; and D-glucose based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T09A12.1 | |||||||
| Corresponding_CDS_history | T09A12.1:wp105 | ||||||||
| Corresponding_transcript | T09A12.1.1 | ||||||||
| Associated_feature | WBsf660390 | ||||||||
| WBsf718131 | |||||||||
| WBsf997170 | |||||||||
| WBsf228647 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00018480 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052910 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103417 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016224 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035370 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1029101 | ||||||||
| Expr1038876 | |||||||||
| Expr1156511 | |||||||||
| Expr2006020 | |||||||||
| Expr2024235 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (122) | |||||||||
| Interaction (24) | |||||||||
| Map_info | Positive | Positive_clone | T09A12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 3.69717 | |||||||
| Method | Gene |
