WormBase Tree Display for Gene: WBGene00020411

WBGene00020411 SMap: S_parent: Sequence: T10E9
  Identity: Version: 1
    Name: Sequence_name: T10E9.1
      Molecular_name: T10E9.1
        T10E9.1.1
        CE13543
      Other_name: CELE_T10E9.1 Accession_evidence: NDB BX284601
      Public_name: T10E9.1
    DB_info: Database: AceView gene 1H121
        WormQTL gene WBGene00020411
        WormFlux gene WBGene00020411
        NDB locus_tag CELE_T10E9.1
        Panther gene CAEEL|WormBase=WBGene00020411|UniProtKB=O01606
          family PTHR31006
        NCBI gene 172366
        RefSeq protein NM_059484.2
        TREEFAM TREEFAM_ID TF343183
        TrEMBL UniProtAcc O01606
        UniProt_GCRP UniProtAcc O01606
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (18)
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP1328
    Ortholog (48)
    Paralog (17)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in several structures, including ABalpapppa; ABalppappa; ABarapappa; GLR; and germ line based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; hsf-1; and sir-2.1 based on microarray and RNA-seq studies. Is affected by seven chemicals including manganese chloride; Zidovudine; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain and F-box protein she-1-like. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T10E9.1
    Corresponding_transcript: T10E9.1.1
    Other_sequence: CBC02788_1
    Associated_feature: WBsf217850
  Experimental_info: RNAi_result: WBRNAi00053051 Inferred_automatically: RNAi_primary
      WBRNAi00062535 Inferred_automatically: RNAi_primary
      WBRNAi00035442 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1020796
      Expr1038901
      Expr1156658
      Expr2006080
      Expr2024294
    Drives_construct: WBCnstr00025162
    Construct_product: WBCnstr00025162
    Microarray_results (18)
    Expression_cluster (105)
    SAGE_tag: SAGE:ctgtttcatctacaaaa Strand: Sense
        Unambiguously_mapped
      SAGE:aacccaagtg Strand: Sense
        Unambiguously_mapped
      SAGE:attcatagta Strand: Antisense
      SAGE:aacccaagtggcctaga Strand: Sense
        Unambiguously_mapped
      SAGE:attcatagtagaagagg Strand: Antisense
      SAGE:gaaagttctctaaaagt Strand: Sense
        Unambiguously_mapped
      SAGE:acgtcttcat Strand: Antisense
    Interaction (35)
  Map_info: Positive: Positive_clone: T10E9 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 1.21079
  Reference: WBPaper00012854
  Method: Gene