WormBase Tree Display for Gene: WBGene00020419
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| WBGene00020419 | SMap | S_parent | Sequence | T10E9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | acdh-4 | Person_evidence | WBPerson7030 | |||||
| WBPerson1657 | |||||||||
| Sequence_name | T10E9.9 | ||||||||
| Molecular_name | T10E9.9a | ||||||||
| T10E9.9a.1 | |||||||||
| CE34367 | |||||||||
| T10E9.9b | |||||||||
| CE50148 | |||||||||
| T10E9.9b.1 | |||||||||
| Other_name | CELE_T10E9.9 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | acdh-4 | ||||||||
| DB_info | Database | AceView | gene | 1H122 | |||||
| WormQTL | gene | WBGene00020419 | |||||||
| WormFlux | gene | WBGene00020419 | |||||||
| NDB | locus_tag | CELE_T10E9.9 | |||||||
| Panther | gene | CAEEL|WormBase=T10E9.9b|UniProtKB=A0A0K3AQR2 | |||||||
| family | PTHR43884 | ||||||||
| NCBI | gene | 172367 | |||||||
| RefSeq | protein | NM_059485.5 | |||||||
| NM_001313506.3 | |||||||||
| TrEMBL | UniProtAcc | O01607 | |||||||
| A0A0K3AQR2 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A0K3AQR2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 17 Apr 2008 14:02:17 | WBPerson2970 | Name_change | CGC_name | acdh-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | acdh | ||||||||
| Allele (26) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00000586 | ||||||||
| 00000587 | |||||||||
| 00000588 | |||||||||
| 00000589 | |||||||||
| 00125046 | |||||||||
| 00125047 | |||||||||
| Contained_in_operon | CEOP1952 | ||||||||
| CEOP1954 | |||||||||
| CEOP1332 | |||||||||
| Ortholog (38) | |||||||||
| Paralog (22) | |||||||||
| Structured_description | Automated_description | Predicted to enable acyl-CoA dehydrogenase activity. Predicted to be located in mitochondrion. Is an ortholog of human ACADSB (acyl-CoA dehydrogenase short/branched chain). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T10E9.9a | |||||||
| T10E9.9b | |||||||||
| Corresponding_CDS_history | T10E9.9:wp101 | ||||||||
| Corresponding_transcript | T10E9.9a.1 | ||||||||
| T10E9.9b.1 | |||||||||
| Other_sequence | Tcir_isotig00705 | ||||||||
| MC05828 | |||||||||
| Tcir_isotig00704 | |||||||||
| Tcol_isotig13762 | |||||||||
| CSC00917_1 | |||||||||
| MCC06003_1 | |||||||||
| Tcir_isotig00706 | |||||||||
| FD514438.1 | |||||||||
| Associated_feature | WBsf219602 | ||||||||
| WBsf219603 | |||||||||
| Experimental_info | RNAi_result (17) | ||||||||
| Expr_pattern | Expr1027220 | ||||||||
| Expr1156666 | |||||||||
| Expr2009135 | |||||||||
| Expr2027372 | |||||||||
| Drives_construct | WBCnstr00025156 | ||||||||
| Construct_product | WBCnstr00025156 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (114) | |||||||||
| Interaction (35) | |||||||||
| Map_info | Map | I | Position | 1.21096 | Error | 9.2e-05 | |||
| Positive | Positive_clone | T10E9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
