WormBase Tree Display for Gene: WBGene00020490
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WBGene00020490 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | tmc-1 | Person_evidence | WBPerson260 | |||||
Sequence_name | T13G4.3 | ||||||||
Molecular_name | T13G4.3 | ||||||||
T13G4.3.1 | |||||||||
CE37147 | |||||||||
T13G4.3.2 | |||||||||
Other_name | R193.f | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
T13G4.e | Curator_confirmed | WBPerson1983 | |||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_T13G4.3 | Accession_evidence | NDB | BX284606 | ||||||
Public_name | tmc-1 | ||||||||
DB_info | Database | AceView | gene | XB793 | |||||
WormQTL | gene | WBGene00020490 | |||||||
WormFlux | gene | WBGene00020490 | |||||||
NDB | locus_tag | CELE_T13G4.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00020490|UniProtKB=D3KZG3 | |||||||
family | PTHR23302 | ||||||||
NCBI | gene | 188483 | |||||||
RefSeq | protein | NM_075820.9 | |||||||
SwissProt | UniProtAcc | D3KZG3 | |||||||
UniProt_GCRP | UniProtAcc | D3KZG3 | |||||||
OMIM | gene | 606706 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 20 Apr 2011 10:05:24 | WBPerson2970 | Name_change | CGC_name | tmc-1 | ||||
Status | Live | ||||||||
Gene_info (9) | |||||||||
Disease_info | Potential_model | DOID:0110520 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:16513) | ||||
DOID:10003 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:16513) | ||||||
DOID:0110563 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:16513) | ||||||
Molecular_info | Corresponding_CDS | T13G4.3 | |||||||
Corresponding_CDS_history | T13G4.3:wp88 | ||||||||
T13G4.3:wp128 | |||||||||
Corresponding_transcript | T13G4.3.1 | ||||||||
T13G4.3.2 | |||||||||
Other_sequence (22) | |||||||||
Associated_feature (14) | |||||||||
Experimental_info | RNAi_result | WBRNAi00018692 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00053286 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00017899 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (13) | |||||||||
Drives_construct | WBCnstr00009854 | ||||||||
WBCnstr00017536 | |||||||||
WBCnstr00020650 | |||||||||
WBCnstr00025101 | |||||||||
WBCnstr00040831 | |||||||||
WBCnstr00042184 | |||||||||
WBCnstr00042981 | |||||||||
Construct_product | WBCnstr00017537 | ||||||||
WBCnstr00025101 | |||||||||
WBCnstr00040715 | |||||||||
Regulate_expr_cluster | WBPaper00065746:tmc-1(rg1003)_downregulated | ||||||||
WBPaper00065746:tmc-1(rg1003)_upregulated | |||||||||
Microarray_results (19) | |||||||||
Expression_cluster (143) | |||||||||
Interaction (13) | |||||||||
Anatomy_function | WBbtf0953 | ||||||||
WBbtf0954 | |||||||||
WBbtf0956 | |||||||||
Map_info | Map | X | Position | -18.4825 | |||||
Positive | Positive_clone | T13G4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (19) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |