WormBase Tree Display for Gene: WBGene00020532
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WBGene00020532 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | math-42 | Person_evidence | WBPerson655 | |||||
Sequence_name | T16A1.1 | ||||||||
Molecular_name | T16A1.1 | ||||||||
T16A1.1.1 | |||||||||
CE54041 | |||||||||
Other_name | CELE_T16A1.1 | Accession_evidence | NDB | BX284602 | |||||
Public_name | math-42 | ||||||||
DB_info | Database | WormQTL | gene | WBGene00020532 | |||||
SignaLink | protein | WBGene00020532 | |||||||
WormFlux | gene | WBGene00020532 | |||||||
NDB | locus_tag | CELE_T16A1.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00020532|UniProtKB=Q2PJ79 | |||||||
family | PTHR46308 | ||||||||
NCBI | gene | 173566 | |||||||
RefSeq | protein | NM_001377713.4 | |||||||
TrEMBL | UniProtAcc | A0A5S9MN87 | |||||||
UniProt_GCRP | UniProtAcc | A0A5S9MN87 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 12 Dec 2005 17:54:47 | WBPerson2970 | Name_change | CGC_name | math-42 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | math | ||||||||
Allele (299) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (18) | |||||||||
Paralog (85) | |||||||||
Structured_description | Automated_description | Expressed in intestine. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; and TRAF-like. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T16A1.1 | |||||||
Corresponding_CDS_history | T16A1.1:wp130 | ||||||||
T16A1.1:wp153 | |||||||||
T16A1.1a:wp274 | |||||||||
T16A1.1b:wp274 | |||||||||
Corresponding_transcript | T16A1.1.1 | ||||||||
Other_sequence | FG585450.1 | ||||||||
Associated_feature | WBsf657381 | ||||||||
Experimental_info | RNAi_result | WBRNAi00018750 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00053393 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00001804 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00035602 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr2137 | ||||||||
Expr1016524 | |||||||||
Expr1038947 | |||||||||
Expr1156970 | |||||||||
Expr2013415 | |||||||||
Expr2031649 | |||||||||
Drives_construct | WBCnstr00025072 | ||||||||
Construct_product | WBCnstr00025072 | ||||||||
Microarray_results (24) | |||||||||
Expression_cluster (96) | |||||||||
Map_info | Map | II | Position | -13.8659 | Error | 0.002796 | |||
Positive | Positive_clone | T16A1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |