WormBase Tree Display for Gene: WBGene00020586
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WBGene00020586 | SMap | S_parent | Sequence | T19F4 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | frpr-18 | Person_evidence | WBPerson260 | |||
Sequence_name | T19F4.1 | ||||||
Molecular_name | T19F4.1a | ||||||
T19F4.1a.1 | |||||||
CE28679 | |||||||
T19F4.1b | |||||||
CE29349 | |||||||
T19F4.1c | |||||||
CE52203 | |||||||
T19F4.1b.1 | |||||||
T19F4.1c.1 | |||||||
Other_name | CELE_T19F4.1 | Accession_evidence | NDB | BX284605 | |||
Public_name | frpr-18 | ||||||
DB_info | Database | AceView | gene | 5H353 | |||
WormQTL | gene | WBGene00020586 | |||||
WormFlux | gene | WBGene00020586 | |||||
NDB | locus_tag | CELE_T19F4.1 | |||||
Panther | gene | CAEEL|WormBase=WBGene00020586|UniProtKB=G5EEB1 | |||||
family | PTHR47323 | ||||||
NCBI | gene | 179076 | |||||
RefSeq | protein | NM_001356672.4 | |||||
NM_072345.7 | |||||||
NM_001356671.3 | |||||||
SwissProt | UniProtAcc | G5EEB1 | |||||
TREEFAM | TREEFAM_ID | TF316702 | |||||
UniProt_GCRP | UniProtAcc | G5EEB1 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | frpr | ||||||
Allele (49) | |||||||
Strain | WBStrain00032724 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (18) | |||||||
Ortholog (29) | |||||||
Paralog (187) | |||||||
Structured_description | Concise_description | frpr-18 encodes, by alternative splicing, two G-protein coupled receptors for the flp-2-encoded peptides SPREPIRFamide (FLP2-A) and LRGEPIRFamide (FLP2-B); T19F4.1B protein has an extension of 30 residues more than T19F4.1A in the intracellular C-terminal region; T19F4.1A/B are probably linked to the G(q) pathway. | Paper_evidence | WBPaper00025071 | |||
WBPaper00044852 | |||||||
Person_evidence | WBPerson197 | ||||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson567 | |||||||
Date_last_updated | 10 Feb 2016 00:00:00 | ||||||
Automated_description | Enables G protein-coupled receptor activity. Involved in G protein-coupled receptor signaling pathway; positive regulation of protein secretion; and sleep. Located in plasma membrane. Expressed in enteric muscle and neurons. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T19F4.1a | |||||
T19F4.1b | |||||||
T19F4.1c | |||||||
Corresponding_CDS_history | T19F4.1a:wp261 | ||||||
Corresponding_transcript (3) | |||||||
Other_sequence | PPC17509_1 | ||||||
JI174236.1 | |||||||
Oden_isotig19659 | |||||||
Dviv_isotig11885 | |||||||
Acan_isotig11359 | |||||||
Dviv_isotig22130 | |||||||
Dviv_isotig11883 | |||||||
Dviv_isotig11884 | |||||||
Dviv_isotig11882 | |||||||
Associated_feature | WBsf1000377 | ||||||
WBsf1000378 | |||||||
WBsf1000379 | |||||||
WBsf1000380 | |||||||
WBsf1000381 | |||||||
WBsf1000382 | |||||||
WBsf1019868 | |||||||
WBsf1019869 | |||||||
WBsf1019870 | |||||||
WBsf231921 | |||||||
Experimental_info | RNAi_result | WBRNAi00072225 | Inferred_automatically | RNAi_primary | |||
WBRNAi00053558 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00018862 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00000682 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00113670 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00103535 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr13088 | ||||||
Expr1011653 | |||||||
Expr1157121 | |||||||
Expr2011900 | |||||||
Expr2030137 | |||||||
Drives_construct | WBCnstr00025028 | ||||||
WBCnstr00038585 | |||||||
Construct_product | WBCnstr00025028 | ||||||
Microarray_results (24) | |||||||
Expression_cluster (111) | |||||||
Interaction | WBInteraction000356676 | ||||||
WBInteraction000559828 | |||||||
WBInteraction000559833 | |||||||
WBInteraction000563597 | |||||||
Map_info | Map | V | Position | 0.389315 | |||
Positive | Positive_clone | T19F4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00025071 | ||||||
WBPaper00032078 | |||||||
WBPaper00044852 | |||||||
WBPaper00050063 | |||||||
WBPaper00055865 | |||||||
WBPaper00065376 | |||||||
WBPaper00065946 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |