WormBase Tree Display for Gene: WBGene00020638

WBGene00020638 SMap: S_parent: Sequence: CHROMOSOME_III
  Identity: Version: 2
    Name: CGC_name: fbxa-43 Person_evidence: WBPerson655
      Sequence_name: T20H9.2
      Molecular_name: T20H9.2
        T20H9.2.1
        CE54162
      Other_name: CELE_T20H9.2 Accession_evidence: NDB BX284603
      Public_name: fbxa-43
    DB_info: Database: AceView gene 3D344
        WormQTL gene WBGene00020638
        WormFlux gene WBGene00020638
        NDB locus_tag CELE_T20H9.2
        Panther gene CAEEL|WormBase=WBGene00020638|UniProtKB=O44888
          family PTHR23015
        NCBI gene 188665
        RefSeq protein NM_001381765.2
        TREEFAM TREEFAM_ID TF322360
        TrEMBL UniProtAcc O44888
        UniProt_GCRP UniProtAcc O44888
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 12 Dec 2005 15:18:56 WBPerson2970 Name_change: CGC_name: fbxa-43
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (27)
    RNASeq_FPKM (74)
    Ortholog (37)
    Paralog (222)
    Structured_description: Automated_description: Enriched in command interneuron and rectal epithelial cell based on tiling array and single-cell RNA-seq studies. Is affected by several genes including age-1; eat-2; and sir-2.1 based on microarray; tiling array; and RNA-seq studies. Is affected by six chemicals including hydrogen sulfide; Psoralens; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T20H9.2
    Corresponding_CDS_history: T20H9.2:wp151
      T20H9.2:wp275
    Corresponding_transcript: T20H9.2.1
    Associated_feature: WBsf226267
  Experimental_info: RNAi_result: WBRNAi00018938 Inferred_automatically: RNAi_primary
      WBRNAi00007066 Inferred_automatically: RNAi_primary
      WBRNAi00053679 Inferred_automatically: RNAi_primary
      WBRNAi00035730 Inferred_automatically: RNAi_primary
      WBRNAi00053678 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1157231
      Expr2011546
      Expr2029783
    Microarray_results (13)
    Expression_cluster (78)
    Interaction (20)
  Map_info: Map: III Position: -14.8446 Error: 0.001398
    Positive: Positive_clone: T20H9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene