WormBase Tree Display for Gene: WBGene00020661

WBGene00020661 SMap: S_parent: Sequence: T21G5
  Identity: Version: 2
    Name: CGC_name: smz-2 Paper_evidence: WBPaper00028451
          Person_evidence: WBPerson109
      Sequence_name: T21G5.4
      Molecular_name: T21G5.4
        T21G5.4.1
        CE13894
      Other_name: CELE_T21G5.4 Accession_evidence: NDB BX284601
      Public_name: smz-2
    DB_info: Database: AceView gene 1H448
        WormQTL gene WBGene00020661
        WormFlux gene WBGene00020661
        NDB locus_tag CELE_T21G5.4
        Panther gene CAEEL|WormBase=WBGene00020661|UniProtKB=O02063
          family PTHR31327
        NCBI gene 172415
        RefSeq protein NM_059564.7
        TREEFAM TREEFAM_ID TF319103
        TrEMBL UniProtAcc O02063
        UniProt_GCRP UniProtAcc O02063
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 08 Aug 2013 16:41:57 WBPerson2970 Name_change: CGC_name: smz-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: smz
    Allele (18)
    Strain: WBStrain00051367
    RNASeq_FPKM (74)
    GO_annotation: 00026441
      00026442
      00026443
    Ortholog (37)
    Paralog (14)
    Structured_description: Concise_description: smz-2 encodes a PDZ domain-containing protein; SMZ-2 activity is required for spermatocytes to progress through meiotic divisions, and specifically for meiotic chromosome segregation; SMZ-2 localizes to spermatogenic meiotic chromosomes and mature sperm chromatin. Paper_evidence: WBPaper00028451
          Curator_confirmed: WBPerson1843
            WBPerson324
          Date_last_updated: 12 Nov 2014 00:00:00
      Automated_description: Involved in male meiosis chromosome segregation. Part of chromatin. Expressed in sperm. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T21G5.4
    Corresponding_transcript: T21G5.4.1
    Other_sequence (58)
    Associated_feature: WBsf219648
  Experimental_info: RNAi_result: WBRNAi00069053 Inferred_automatically: RNAi_primary
      WBRNAi00035771 Inferred_automatically: RNAi_primary
      WBRNAi00068683 Inferred_automatically: RNAi_primary
      WBRNAi00068684 Inferred_automatically: RNAi_primary
      WBRNAi00069056 Inferred_automatically: RNAi_primary
      WBRNAi00069054 Inferred_automatically: RNAi_primary
      WBRNAi00069055 Inferred_automatically: RNAi_primary
      WBRNAi00004250 Inferred_automatically: RNAi_primary
      WBRNAi00053759 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr4210
      Expr1157308
      Expr2015933
      Expr2034166
    Drives_construct: WBCnstr00024977
    Construct_product: WBCnstr00024977
    Antibody: WBAntibody00001147
      WBAntibody00001148
    Microarray_results (15)
    Expression_cluster (218)
    Interaction (329)
  Map_info: Map: I Position: 1.43458
    Positive: Positive_clone: T21G5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00028451
    WBPaper00030887
    WBPaper00032233
    WBPaper00052036
    WBPaper00057218
    WBPaper00057785
    WBPaper00064502
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene