WormBase Tree Display for Gene: WBGene00020725
expand all nodes | collapse all nodes | view schema
| WBGene00020725 | SMap | S_parent | Sequence | T23C6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cnp-3 | Person_evidence | WBPerson746 | |||||
| Sequence_name | T23C6.3 | ||||||||
| Molecular_name | T23C6.3 | ||||||||
| T23C6.3.1 | |||||||||
| CE07528 | |||||||||
| Other_name | CELE_T23C6.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | cnp-3 | ||||||||
| DB_info | Database | AceView | gene | XR750 | |||||
| WormQTL | gene | WBGene00020725 | |||||||
| WormFlux | gene | WBGene00020725 | |||||||
| NDB | locus_tag | CELE_T23C6.3 | |||||||
| NCBI | gene | 181752 | |||||||
| RefSeq | protein | NM_078375.9 | |||||||
| SwissProt | UniProtAcc | O02039 | |||||||
| TREEFAM | TREEFAM_ID | TF322206 | |||||||
| UniProt_GCRP | UniProtAcc | O02039 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 19 Aug 2008 16:55:43 | WBPerson2970 | Name_change | CGC_name | cnp-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cnp | ||||||||
| Allele (32) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00026389 | ||||||||
| 00026390 | |||||||||
| Ortholog (16) | |||||||||
| Paralog | WBGene00017404 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00019578 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be located in nucleus. Expressed in hypodermis; intestine; spermatheca; and uterus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T23C6.3 | |||||||
| Corresponding_transcript | T23C6.3.1 | ||||||||
| Associated_feature | WBsf654726 | ||||||||
| WBsf654727 | |||||||||
| WBsf718839 | |||||||||
| WBsf1008810 | |||||||||
| WBsf1024962 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00019063 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00053903 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035850 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8235 | ||||||||
| Expr1018571 | |||||||||
| Expr1039028 | |||||||||
| Expr1157450 | |||||||||
| Expr2010283 | |||||||||
| Expr2028525 | |||||||||
| Drives_construct | WBCnstr00013200 | ||||||||
| WBCnstr00024930 | |||||||||
| Construct_product | WBCnstr00013200 | ||||||||
| WBCnstr00024930 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (172) | |||||||||
| Interaction | WBInteraction000261734 | ||||||||
| WBInteraction000322416 | |||||||||
| WBInteraction000354534 | |||||||||
| WBInteraction000381809 | |||||||||
| WBInteraction000399037 | |||||||||
| WBInteraction000425965 | |||||||||
| WBInteraction000541841 | |||||||||
| WBInteraction000544519 | |||||||||
| WBInteraction000585310 | |||||||||
| Map_info | Map | X | Position | 24.0799 | Error | 0.002131 | |||
| Positive | Positive_clone | T23C6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00028722 | ||||||||
| WBPaper00031862 | |||||||||
| WBPaper00062388 | |||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
