WormBase Tree Display for Gene: WBGene00020727
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| WBGene00020727 | SMap | S_parent | Sequence | T23C6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | npr-21 | Person_evidence | WBPerson260 | |||||
| WBPerson42 | |||||||||
| Sequence_name | T23C6.5 | ||||||||
| Molecular_name | T23C6.5 | ||||||||
| T23C6.5.1 | |||||||||
| CE35783 | |||||||||
| Other_name | CELE_T23C6.5 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | npr-21 | ||||||||
| DB_info | Database | AceView | gene | XR768 | |||||
| WormQTL | gene | WBGene00020727 | |||||||
| WormFlux | gene | WBGene00020727 | |||||||
| NDB | locus_tag | CELE_T23C6.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020727|UniProtKB=O02043 | |||||||
| family | PTHR24230 | ||||||||
| NCBI | gene | 188781 | |||||||
| RefSeq | protein | NM_078378.4 | |||||||
| TREEFAM | TREEFAM_ID | TF350002 | |||||||
| TrEMBL | UniProtAcc | O02043 | |||||||
| UniProt_GCRP | UniProtAcc | O02043 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Apr 2012 16:15:43 | WBPerson2970 | Name_change | CGC_name | npr-21 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | npr | ||||||||
| Allele (43) | |||||||||
| Strain | WBStrain00051542 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00026393 | ||||||||
| 00026394 | |||||||||
| 00026395 | |||||||||
| 00026396 | |||||||||
| 00125304 | |||||||||
| 00125305 | |||||||||
| 00125306 | |||||||||
| Ortholog (23) | |||||||||
| Paralog | WBGene00007614 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00008736 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00011578 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00012275 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00013642 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00013871 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00015000 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00018344 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00022584 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00021328 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to enable G protein-coupled peptide receptor activity. Predicted to be involved in neuropeptide signaling pathway. Predicted to be located in membrane. Expressed in head neurons; intestine; tail neurons; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T23C6.5 | |||||||
| Corresponding_CDS_history | T23C6.5:wp109 | ||||||||
| Corresponding_transcript | T23C6.5.1 | ||||||||
| Other_sequence | JI226953.1 | ||||||||
| Associated_feature | WBsf1008815 | ||||||||
| WBsf1008816 | |||||||||
| WBsf1008817 | |||||||||
| WBsf1008818 | |||||||||
| WBsf1008819 | |||||||||
| WBsf1008820 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00019064 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035852 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053906 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076702 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7676 | ||||||||
| Expr1010388 | |||||||||
| Expr1157452 | |||||||||
| Expr2014407 | |||||||||
| Expr2032648 | |||||||||
| Drives_construct | WBCnstr00012821 | ||||||||
| WBCnstr00024928 | |||||||||
| Construct_product | WBCnstr00024928 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (82) | |||||||||
| Interaction | WBInteraction000031335 | ||||||||
| WBInteraction000032439 | |||||||||
| WBInteraction000032466 | |||||||||
| WBInteraction000341891 | |||||||||
| WBInteraction000436194 | |||||||||
| WBInteraction000436195 | |||||||||
| WBInteraction000505878 | |||||||||
| Map_info | Map | X | Position | 24.0819 | |||||
| Positive | Positive_clone | T23C6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
