WormBase Tree Display for Gene: WBGene00020997
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| WBGene00020997 | SMap | S_parent | Sequence | W03F8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | gpa-18 | Person_evidence | WBPerson567 | |||||
| Sequence_name | W03F8.9 | ||||||||
| Molecular_name | W03F8.9a | ||||||||
| W03F8.9a.1 | |||||||||
| CE49465 | |||||||||
| W03F8.9b | |||||||||
| CE49352 | |||||||||
| W03F8.9b.1 | |||||||||
| Other_name | CELE_W03F8.9 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | gpa-18 | ||||||||
| DB_info | Database | AceView | gene | 4F958 | |||||
| WormQTL | gene | WBGene00020997 | |||||||
| WormFlux | gene | WBGene00020997 | |||||||
| NDB | locus_tag | CELE_W03F8.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020997|UniProtKB=V6CLB7 | |||||||
| family | PTHR10218 | ||||||||
| NCBI | gene | 189161 | |||||||
| RefSeq | protein | NM_001306790.3 | |||||||
| NM_001306789.3 | |||||||||
| TrEMBL | UniProtAcc | V6CLF3 | |||||||
| V6CLB7 | |||||||||
| UniProt_GCRP | UniProtAcc | V6CLB7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 20 Dec 2006 12:00:52 | WBPerson1849 | Event | Acquires_merge | WBGene00020996 | ||||
| 3 | 20 Dec 2006 12:21:19 | WBPerson567 | Name_change | CGC_name | gpa-18 | ||||
| Acquires_merge | WBGene00020996 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gpa | ||||||||
| Allele (98) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (25) | |||||||||
| Paralog (21) | |||||||||
| Structured_description | Concise_description | gpa-18 encodes a divergent G protein alpha subunit, with roughly as much similarity to fungal as to metazoan homologs. | Curator_confirmed | WBPerson567 | |||||
| Date_last_updated | 11 Dec 2006 00:00:00 | ||||||||
| Automated_description | Predicted to enable G protein-coupled receptor binding activity; G-protein beta/gamma-subunit complex binding activity; and GTPase activity. Predicted to be involved in adenylate cyclase-activating dopamine receptor signaling pathway and sensory perception of chemical stimulus. Predicted to be part of heterotrimeric G-protein complex. Expressed in neurons; tail; and in male. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W03F8.9a | |||||||
| W03F8.9b | |||||||||
| Corresponding_CDS_history | W03F8.9:wp154 | ||||||||
| W03F8.9:wp169 | |||||||||
| W03F8.9:wp230 | |||||||||
| W03F8.9:wp240 | |||||||||
| Corresponding_transcript | W03F8.9a.1 | ||||||||
| W03F8.9b.1 | |||||||||
| Other_sequence | Dviv_isotig03241 | ||||||||
| EL889859.1 | |||||||||
| Dviv_isotig03245 | |||||||||
| Dviv_isotig03238 | |||||||||
| Associated_feature | WBsf996456 | ||||||||
| WBsf996457 | |||||||||
| WBsf996458 | |||||||||
| WBsf1017349 | |||||||||
| WBsf1017350 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00054705 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00036236 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054704 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019561 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr15373 | ||||||||
| Expr1022606 | |||||||||
| Expr1158242 | |||||||||
| Expr2012189 | |||||||||
| Expr2030425 | |||||||||
| Drives_construct | WBCnstr00024739 | ||||||||
| Construct_product | WBCnstr00024739 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (94) | |||||||||
| Interaction | WBInteraction000221829 | ||||||||
| WBInteraction000236388 | |||||||||
| WBInteraction000253504 | |||||||||
| WBInteraction000364512 | |||||||||
| WBInteraction000368146 | |||||||||
| WBInteraction000422928 | |||||||||
| WBInteraction000464502 | |||||||||
| WBInteraction000464508 | |||||||||
| Map_info | Map | IV | Position | 1.55686 | Error | 0.000572 | |||
| Positive | Positive_clone | W03F8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
