WormBase Tree Display for Gene: WBGene00021174

WBGene00021174 SMap: S_parent: Sequence: Y8A9A
  Identity: Version: 2
    Name: CGC_name: fbxb-99 Person_evidence: WBPerson655
      Sequence_name: Y8A9A.5
      Molecular_name: Y8A9A.5
        Y8A9A.5.1
        CE39533
      Other_name: CELE_Y8A9A.5 Accession_evidence: NDB BX284602
      Public_name: fbxb-99
    DB_info: Database: AceView gene 2E80
        WormQTL gene WBGene00021174
        WormFlux gene WBGene00021174
        NDB locus_tag CELE_Y8A9A.5
        Panther gene CAEEL|WormBase=WBGene00021174|UniProtKB=Q9TYK5
          family PTHR22899
        NCBI gene 189402
        RefSeq protein NM_062252.3
        TrEMBL UniProtAcc Q9TYK5
        UniProt_GCRP UniProtAcc Q9TYK5
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 12 Dec 2005 17:22:20 WBPerson2970 Name_change: CGC_name: fbxb-99
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxb
    Allele (34)
    RNASeq_FPKM (74)
    Ortholog (35)
    Paralog (143)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in several structures, including ABplpppppp; ABprpppppp; B cell; DVA; and body muscle cell based on single-cell RNA-seq studies. Is affected by several genes including eat-2; sir-2.1; and pgl-1 based on RNA-seq and microarray studies. Is affected by Rifampin; Psoralens; and Sirolimus based on RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; F-box associated; and F-box associated domain, type 2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y8A9A.5
    Corresponding_CDS_history: Y8A9A.5:wp152
    Corresponding_transcript: Y8A9A.5.1
    Associated_feature: WBsf649984
      WBsf987385
      WBsf987386
      WBsf987387
  Experimental_info: RNAi_result: WBRNAi00058616 Inferred_automatically: RNAi_primary
      WBRNAi00026989 Inferred_automatically: RNAi_primary
      WBRNAi00021528 Inferred_automatically: RNAi_primary
      WBRNAi00027551 Inferred_automatically: RNAi_primary
      WBRNAi00021530 Inferred_automatically: RNAi_primary
      WBRNAi00026988 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1017988
      Expr1039235
      Expr1162038
      Expr2011698
      Expr2029937
    Drives_construct: WBCnstr00024647
    Construct_product: WBCnstr00024647
    Microarray_results (17)
    Expression_cluster (46)
    Interaction (32)
  Map_info: Map: II Position: -6.21139 Error: 0.000268
    Positive: Positive_clone: Y8A9A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene