WormBase Tree Display for Gene: WBGene00021227
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| WBGene00021227 | SMap | S_parent | Sequence | Y19D10A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mct-1 | Paper_evidence | WBPaper00041876 | |||||
| Person_evidence | WBPerson3620 | ||||||||
| Sequence_name | Y19D10A.12 | ||||||||
| Molecular_name | Y19D10A.12a | ||||||||
| Y19D10A.12a.1 | |||||||||
| CE32237 | |||||||||
| Y19D10A.12b | |||||||||
| CE51136 | |||||||||
| Y19D10A.12c | |||||||||
| CE51065 | |||||||||
| Y19D10A.12b.1 | |||||||||
| Y19D10A.12c.1 | |||||||||
| Other_name | Y19D10A.l | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y19D10A.12 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | mct-1 | ||||||||
| DB_info | Database | AceView | gene | 5C850 | |||||
| WormQTL | gene | WBGene00021227 | |||||||
| WormFlux | gene | WBGene00021227 | |||||||
| NDB | locus_tag | CELE_Y19D10A.12 | |||||||
| NCBI | gene | 189489 | |||||||
| RefSeq | protein | NM_001316830.1 | |||||||
| NM_001316831.1 | |||||||||
| NM_071254.2 | |||||||||
| TrEMBL | UniProtAcc | A0A0M7RE14 | |||||||
| Q9UAT3 | |||||||||
| A0A0M7RFF6 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9UAT3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Jan 2013 14:59:12 | WBPerson2970 | Name_change | CGC_name | mct-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mct | ||||||||
| Allele (18) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00125651 | ||||||||
| 00125652 | |||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00003986 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00008214 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00010340 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00015273 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00020168 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00010834 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00013353 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00015676 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00017369 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Expressed in pharynx. Is an ortholog of human SLC16A4 (solute carrier family 16 member 4). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y19D10A.12a | |||||||
| Y19D10A.12b | |||||||||
| Y19D10A.12c | |||||||||
| Corresponding_CDS_history | Y19D10A.12:wp88 | ||||||||
| Corresponding_transcript | Y19D10A.12a.1 | ||||||||
| Y19D10A.12b.1 | |||||||||
| Y19D10A.12c.1 | |||||||||
| Other_sequence | GO251386.1 | ||||||||
| GT736853.1 | |||||||||
| CJC04169_1 | |||||||||
| JI169240.1 | |||||||||
| CRC02369_1 | |||||||||
| XI02791 | |||||||||
| Associated_feature | WBsf233414 | ||||||||
| WBsf233415 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00036703 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00039275 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039274 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039276 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009900 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020102 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020108 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr10712 | ||||||||
| Expr1159151 | |||||||||
| Drives_construct | WBCnstr00017203 | ||||||||
| WBCnstr00024613 | |||||||||
| Construct_product | WBCnstr00017203 | ||||||||
| WBCnstr00024613 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (96) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Map | V | Position | -14.8562 | |||||
| Positive | Positive_clone | Y19D10A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061483 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
