WormBase Tree Display for Gene: WBGene00021271
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| WBGene00021271 | SMap | S_parent | Sequence | Y23H5A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | spe-47 | Person_evidence | WBPerson354 | |||||
| Sequence_name | Y23H5A.4 | ||||||||
| Molecular_name | Y23H5A.4a | ||||||||
| Y23H5A.4a.1 | |||||||||
| CE18360 | |||||||||
| Y23H5A.4b | |||||||||
| CE49907 | |||||||||
| Y23H5A.4b.1 | |||||||||
| Other_name | CELE_Y23H5A.4 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | spe-47 | ||||||||
| DB_info | Database | AceView | gene | 1D187 | |||||
| WormQTL | gene | WBGene00021271 | |||||||
| WormFlux | gene | WBGene00021271 | |||||||
| NDB | locus_tag | CELE_Y23H5A.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021271|UniProtKB=O76615 | |||||||
| family | PTHR22920 | ||||||||
| NCBI | gene | 189522 | |||||||
| RefSeq | protein | NM_001306358.3 | |||||||
| NM_058609.3 | |||||||||
| TrEMBL | UniProtAcc | A0A061AKN6 | |||||||
| O76615 | |||||||||
| UniProt_GCRP | UniProtAcc | O76615 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 02 Sep 2013 15:25:46 | WBPerson2970 | Name_change | CGC_name | spe-47 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | spe | ||||||||
| Allele (68) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00038539 | ||||||||
| 00038540 | |||||||||
| 00038541 | |||||||||
| 00038542 | |||||||||
| 00038543 | |||||||||
| 00038544 | |||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00012979 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be located in cytoskeleton. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y23H5A.4a | |||||||
| Y23H5A.4b | |||||||||
| Corresponding_transcript | Y23H5A.4a.1 | ||||||||
| Y23H5A.4b.1 | |||||||||
| Associated_feature | WBsf656067 | ||||||||
| WBsf982917 | |||||||||
| WBsf217317 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00004564 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00036719 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00055700 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022433 | ||||||||
| Expr1159224 | |||||||||
| Expr2016045 | |||||||||
| Expr2034280 | |||||||||
| Drives_construct | WBCnstr00024599 | ||||||||
| Construct_product | WBCnstr00020855 | ||||||||
| WBCnstr00020856 | |||||||||
| WBCnstr00020857 | |||||||||
| WBCnstr00020858 | |||||||||
| WBCnstr00024599 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (131) | |||||||||
| Interaction | WBInteraction000032226 | ||||||||
| WBInteraction000137671 | |||||||||
| WBInteraction000193100 | |||||||||
| WBInteraction000516109 | |||||||||
| WBInteraction000520376 | |||||||||
| WBInteraction000520377 | |||||||||
| WBInteraction000546967 | |||||||||
| WBInteraction000547913 | |||||||||
| WBInteraction000560625 | |||||||||
| Map_info | Map | I | Position | -8.15246 | |||||
| Positive | Positive_clone | Y23H5A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00043752 | ||||||||
| WBPaper00043761 | |||||||||
| WBPaper00048201 | |||||||||
| WBPaper00048204 | |||||||||
| WBPaper00048499 | |||||||||
| WBPaper00052150 | |||||||||
| WBPaper00057911 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
