WormBase Tree Display for Gene: WBGene00021289
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| WBGene00021289 | SMap | S_parent | Sequence | Y25C1A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y25C1A.2 | |||||||
| Molecular_name | Y25C1A.2 | ||||||||
| Y25C1A.2.1 | |||||||||
| CE45900 | |||||||||
| Other_name | CELE_Y25C1A.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | Y25C1A.2 | ||||||||
| DB_info | Database | AceView | gene | 2D403 | |||||
| WormQTL | gene | WBGene00021289 | |||||||
| WormFlux | gene | WBGene00021289 | |||||||
| NDB | locus_tag | CELE_Y25C1A.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021289|UniProtKB=Q9TYL1 | |||||||
| family | PTHR21453 | ||||||||
| NCBI | gene | 189535 | |||||||
| RefSeq | protein | NM_062048.3 | |||||||
| TREEFAM | TREEFAM_ID | TF322011 | |||||||
| TrEMBL | UniProtAcc | Q9TYL1 | |||||||
| UniProt_GCRP | UniProtAcc | Q9TYL1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (15) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (27) | |||||||||
| Paralog (82) | |||||||||
| Structured_description | Automated_description | Enriched in AUA; cholinergic neurons; excretory cell; pharyngeal cell; and in male based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-12; and rrf-3 based on microarray; tiling array; and RNA-seq studies. Is affected by nine chemicals including Zidovudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: TRA-1 regulated and TRA-1 regulated protein R03H10.4. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y25C1A.2 | |||||||
| Corresponding_CDS_history | Y25C1A.2:wp225 | ||||||||
| Corresponding_transcript | Y25C1A.2.1 | ||||||||
| Associated_feature | WBsf644039 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00036738 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00055735 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020138 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015333 | ||||||||
| Expr1159254 | |||||||||
| Expr2007177 | |||||||||
| Expr2025410 | |||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (89) | |||||||||
| Interaction (12) | |||||||||
| Map_info | Positive | Positive_clone | Y25C1A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -8.50063 | |||||||
| Method | Gene |
