WormBase Tree Display for Gene: WBGene00021471
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WBGene00021471 | SMap | S_parent | Sequence | Y39G10AR | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | Sequence_name | Y39G10AR.15 | |||||
Molecular_name | Y39G10AR.15 | ||||||
Y39G10AR.15.1 | |||||||
CE21756 | |||||||
Other_name | CELE_Y39G10AR.15 | Accession_evidence | NDB | BX284601 | |||
Public_name | Y39G10AR.15 | ||||||
DB_info | Database | AceView | gene | 1C890 | |||
WormQTL | gene | WBGene00021471 | |||||
WormFlux | gene | WBGene00021471 | |||||
NDB | locus_tag | CELE_Y39G10AR.15 | |||||
Panther | gene | CAEEL|WormBase=WBGene00021471|UniProtKB=Q95XQ7 | |||||
family | PTHR21720 | ||||||
NCBI | gene | 171794 | |||||
RefSeq | protein | NM_058562.4 | |||||
TREEFAM | TREEFAM_ID | TF316274 | |||||
TrEMBL | UniProtAcc | Q95XQ7 | |||||
UniProt_GCRP | UniProtAcc | Q95XQ7 | |||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Allele (62) | |||||||
Strain | WBStrain00037928 | ||||||
RNASeq_FPKM (74) | |||||||
Ortholog (22) | |||||||
Paralog | WBGene00009182 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00010920 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00017441 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00194892 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00219275 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Enriched in ABalppppapa; ABpraaapapa; AVH; MC neuron; and in male based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by nine chemicals including hydrogen sulfide; rotenone; and manganese chloride based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y39G10AR.15 | |||||
Corresponding_CDS_history | Y39G10AR.15:wp228 | ||||||
Corresponding_transcript | Y39G10AR.15.1 | ||||||
Associated_feature | WBsf648964 | ||||||
WBsf663787 | |||||||
WBsf663946 | |||||||
Experimental_info | RNAi_result | WBRNAi00004550 | Inferred_automatically | RNAi_primary | |||
WBRNAi00056268 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1159750 | ||||||
Expr2007395 | |||||||
Expr2025630 | |||||||
Drives_construct | WBCnstr00024541 | ||||||
Construct_product | WBCnstr00024541 | ||||||
Microarray_results | SMD_Y39G10A_243.B | ||||||
SMD_Y74C10A_154.C | |||||||
176535_at | |||||||
Aff_Y39G10A_243.B | |||||||
GPL19516_CGZ0044979 | |||||||
GPL21109_Y39G10AR.15 | |||||||
GPL8673_Y39G10AR_15P00830 | |||||||
Expression_cluster (126) | |||||||
Interaction | WBInteraction000218039 | ||||||
WBInteraction000544734 | |||||||
Map_info | Positive | Positive_clone | Y39G10AR | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | I | -9.28463 | |||||
Reference | WBPaper00031387 | ||||||
Method | Gene |