WormBase Tree Display for Gene: WBGene00021521
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| WBGene00021521 | SMap | S_parent | Sequence | Y41D4B | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | nhr-287 | Person_evidence | WBPerson600 | ||||||
| WBPerson655 | ||||||||||
| Sequence_name | Y41D4B.20 | |||||||||
| Molecular_name | Y41D4B.20 | |||||||||
| Other_name | CELE_Y41D4B.20 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | nhr-287 | |||||||||
| DB_info | Database | AceView | gene | 4C380 | ||||||
| WormQTL | gene | WBGene00021521 | ||||||||
| WormFlux | gene | WBGene00021521 | ||||||||
| NDB | locus_tag | CELE_Y41D4B.20 | ||||||||
| NCBI | gene | 189824 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 21 Dec 2005 10:23:51 | WBPerson2970 | Name_change | CGC_name | nhr-287 | |||||
| 3 | 12 Nov 2018 17:09:35 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | nhr | |||||||||
| Allele (12) | ||||||||||
| Strain | WBStrain00036850 | |||||||||
| WBStrain00036896 | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00065134 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| Inparanoid_8 | ||||||||||
| Paralog (26) | ||||||||||
| Structured_description | Automated_description | Enriched in ABalpapaap; ABarappaap; AFD; excretory cell; and somatic gonad precursor based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and age-1 based on microarray and RNA-seq studies. Is affected by ten chemicals including Rifampin; Psoralens; and Sirolimus based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | Y41D4B.20:wp268 | ||||||||
| Corresponding_pseudogene | Y41D4B.20 | |||||||||
| Associated_feature | WBsf229779 | |||||||||
| Experimental_info | Expr_pattern | Expr1028629 | ||||||||
| Expr1159873 | ||||||||||
| Expr2014175 | ||||||||||
| Expr2032417 | ||||||||||
| Microarray_results (20) | ||||||||||
| Expression_cluster (49) | ||||||||||
| Map_info | Map | IV | Position | -16.3983 | Error | 0.0211 | ||||
| Positive | Positive_clone | Y41D4B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00028802 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
