WormBase Tree Display for Gene: WBGene00021531
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| WBGene00021531 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y42G9A.1 | |||||||
| Molecular_name | Y42G9A.1 | ||||||||
| Y42G9A.1.1 | |||||||||
| CE24274 | |||||||||
| Other_name | CELE_Y42G9A.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | Y42G9A.1 | ||||||||
| DB_info | Database | AceView | gene | 3H243 | |||||
| WormQTL | gene | WBGene00021531 | |||||||
| WormFlux | gene | WBGene00021531 | |||||||
| NDB | locus_tag | CELE_Y42G9A.1 | |||||||
| NCBI | gene | 175867 | |||||||
| RefSeq | protein | NM_065932.6 | |||||||
| TREEFAM | TREEFAM_ID | TF321871 | |||||||
| TrEMBL | UniProtAcc | Q9N4Z2 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N4Z2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (51) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABarpapaaa; ABplaaaaaa; ABplpaaapa; head mesodermal cell; and mechanosensory neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by seven chemicals including Cry5B; paraquat; and silicon dioxide nanoparticle based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y42G9A.1 | |||||||
| Corresponding_transcript | Y42G9A.1.1 | ||||||||
| Other_sequence | AE04514 | ||||||||
| Dviv_isotig09660 | |||||||||
| AYC04405_1 | |||||||||
| GE625793.1 | |||||||||
| CJC05111_1 | |||||||||
| HBC10506_1 | |||||||||
| Dviv_isotig09659 | |||||||||
| GE626323.1 | |||||||||
| CBC14160_1 | |||||||||
| EX913365.1 | |||||||||
| Associated_feature | WBsf645246 | ||||||||
| WBsf659030 | |||||||||
| WBsf992658 | |||||||||
| WBsf992659 | |||||||||
| WBsf1015038 | |||||||||
| WBsf1015039 | |||||||||
| WBsf225057 | |||||||||
| WBsf225058 | |||||||||
| WBsf225059 | |||||||||
| Experimental_info | RNAi_result (19) | ||||||||
| Expr_pattern | Expr1023246 | ||||||||
| Expr1039413 | |||||||||
| Expr1159913 | |||||||||
| Expr2007463 | |||||||||
| Expr2025700 | |||||||||
| Drives_construct | WBCnstr00024517 | ||||||||
| Construct_product | WBCnstr00024517 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (126) | |||||||||
| Interaction (52) | |||||||||
| Map_info | Positive | Positive_clone | Y42G9A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -1.41307 | |||||||
| Method | Gene |
