WormBase Tree Display for Gene: WBGene00021571
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| WBGene00021571 | SMap | S_parent | Sequence | Y45G12C | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | srbc-81 | Person_evidence | WBPerson522 | |||||
| Sequence_name | Y45G12C.8 | ||||||||
| Molecular_name | Y45G12C.8 | ||||||||
| Y45G12C.8.1 | |||||||||
| CE32259 | |||||||||
| Other_name | CELE_Y45G12C.8 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srbc-81 | ||||||||
| DB_info | Database | AceView | gene | 5C999 | |||||
| WormQTL | gene | WBGene00021571 | |||||||
| WormFlux | gene | WBGene00021571 | |||||||
| NDB | locus_tag | CELE_Y45G12C.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021571|UniProtKB=G5EGF9 | |||||||
| family | PTHR46418 | ||||||||
| NCBI | gene | 189936 | |||||||
| RefSeq | protein | NM_071289.2 | |||||||
| TREEFAM | TREEFAM_ID | TF315371 | |||||||
| TrEMBL | UniProtAcc | G5EGF9 | |||||||
| UniProt_GCRP | UniProtAcc | G5EGF9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 03 Feb 2005 11:21:21 | WBPerson2970 | Name_change | CGC_name | srbc-81 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srbc | ||||||||
| Allele | WBVar01499528 | ||||||||
| WBVar01499167 | |||||||||
| WBVar01499740 | |||||||||
| WBVar01499676 | |||||||||
| WBVar01498943 | |||||||||
| WBVar01498944 | |||||||||
| WBVar01499496 | |||||||||
| WBVar01499316 | |||||||||
| WBVar02135896 | |||||||||
| WBVar01500066 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00020084 | ||||||||
| Ortholog (20) | |||||||||
| Paralog (123) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y45G12C.8 | |||||||
| Corresponding_CDS_history | Y45G12C.8:wp88 | ||||||||
| Corresponding_transcript | Y45G12C.8.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00020629 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056628 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1160099 | ||||||||
| Expression_cluster | WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray | ||||||||
| WBPaper00044246:pgrn-1_ced-3_downregulated | |||||||||
| WBPaper00045420:fertilization_downregulated_transcript | |||||||||
| WBPaper00045774:clk-1_downregulated | |||||||||
| WBPaper00061040:eat-2(ad1116)_upregulated | |||||||||
| WBPaper00061527:sre-33-ZK1025.1_8337 | |||||||||
| SAGE_tag | SAGE:caagacccaa | Strand | Antisense | ||||||
| Interaction (38) | |||||||||
| Map_info | Map | V | Position | -14.8361 | |||||
| Positive | Positive_clone | Y45G12C | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
