WormBase Tree Display for Gene: WBGene00021600
expand all nodes | collapse all nodes | view schema
| WBGene00021600 | SMap | S_parent | Sequence | Y46H3A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y46H3A.4 | |||||||
| Molecular_name | Y46H3A.4a | ||||||||
| Y46H3A.4a.1 | |||||||||
| CE50930 | |||||||||
| Y46H3A.4b | |||||||||
| CE51027 | |||||||||
| Y46H3A.4c | |||||||||
| CE54244 | |||||||||
| Y46H3A.4b.1 | |||||||||
| Y46H3A.4c.1 | |||||||||
| Other_name | CELE_Y46H3A.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | Y46H3A.4 | ||||||||
| DB_info | Database | AceView | gene | 5C286 | |||||
| WormQTL | gene | WBGene00021600 | |||||||
| WormFlux | gene | WBGene00021600 | |||||||
| NDB | locus_tag | CELE_Y46H3A.4 | |||||||
| NCBI | gene | 189962 | |||||||
| RefSeq | protein | NM_001392484.1 | |||||||
| NM_001392483.1 | |||||||||
| NM_001313321.3 | |||||||||
| TrEMBL | UniProtAcc | A0A0K3AT14 | |||||||
| A0A7R9SUN3 | |||||||||
| A0A0K3AYA6 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A7R9SUN3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (35) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00040534 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| Structured_description | Automated_description | Enriched in AIZ; rectal epithelial cell; rectum; and sensory neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and nhr-49 based on RNA-seq and microarray studies. Is affected by twelve chemicals including rotenone; Sodium Chloride; and Psoralens based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y46H3A.4a | |||||||
| Y46H3A.4b | |||||||||
| Y46H3A.4c | |||||||||
| Corresponding_CDS_history | Y46H3A.4:wp218 | ||||||||
| Y46H3A.4:wp249 | |||||||||
| Corresponding_transcript | Y46H3A.4a.1 | ||||||||
| Y46H3A.4b.1 | |||||||||
| Y46H3A.4c.1 | |||||||||
| Associated_feature | WBsf652483 | ||||||||
| WBsf999396 | |||||||||
| WBsf233359 | |||||||||
| WBsf233360 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020181 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00020671 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056701 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037145 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014510 | ||||||||
| Expr1160171 | |||||||||
| Expr2007595 | |||||||||
| Expr2025831 | |||||||||
| Drives_construct | WBCnstr00024489 | ||||||||
| Construct_product | WBCnstr00024489 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (112) | |||||||||
| Interaction | WBInteraction000558036 | ||||||||
| WBInteraction000558056 | |||||||||
| Map_info | Positive | Positive_clone | Y46H3A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -17.2132 | |||||||
| Method | Gene |
