WormBase Tree Display for Gene: WBGene00021602
expand all nodes | collapse all nodes | view schema
| WBGene00021602 | SMap | S_parent | Sequence | Y46H3B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-205 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | Y46H3B.1 | ||||||||
| Molecular_name | Y46H3B.1a | ||||||||
| Y46H3B.1a.1 | |||||||||
| CE30011 | |||||||||
| Y46H3B.1b | |||||||||
| CE50986 | |||||||||
| Y46H3B.1b.1 | |||||||||
| Other_name | CELE_Y46H3B.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | clec-205 | ||||||||
| DB_info | Database | AceView | gene | 5C243 | |||||
| WormQTL | gene | WBGene00021602 | |||||||
| WormFlux | gene | WBGene00021602 | |||||||
| NDB | locus_tag | CELE_Y46H3B.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021602|UniProtKB=Q9N4W4 | |||||||
| family | PTHR22802 | ||||||||
| NCBI | gene | 178657 | |||||||
| RefSeq | protein | NM_001313325.3 | |||||||
| NM_071099.7 | |||||||||
| TrEMBL | UniProtAcc | A0A0K3AYB0 | |||||||
| Q9N4W4 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9N4W4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-205 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (116) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Paralog (23) | |||||||||
| Structured_description | Automated_description | Enriched in intestine based on RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by eleven chemicals including methylmercuric chloride; metformin; and Sirolimus based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y46H3B.1a | |||||||
| Y46H3B.1b | |||||||||
| Corresponding_transcript | Y46H3B.1a.1 | ||||||||
| Y46H3B.1b.1 | |||||||||
| Other_sequence | FG351855.1 | ||||||||
| Associated_feature | WBsf661148 | ||||||||
| WBsf999387 | |||||||||
| WBsf231435 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056704 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1016817 | ||||||||
| Expr1160175 | |||||||||
| Expr2010117 | |||||||||
| Expr2028360 | |||||||||
| Drives_construct | WBCnstr00024488 | ||||||||
| Construct_product | WBCnstr00024488 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (128) | |||||||||
| Map_info | Map | V | Position | -17.6871 | Error | 0.009504 | |||
| Positive | Positive_clone | Y46H3B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031686 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
