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WormBase Tree Display for Gene: WBGene00021610

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Name Class

WBGene00021610SMapS_parentSequenceY46H3D
IdentityVersion2
NameCGC_namenhr-237Person_evidenceWBPerson600
Sequence_nameY46H3D.6
Molecular_nameY46H3D.6a
Y46H3D.6a.1
CE24323
Y46H3D.6b
CE51016
Y46H3D.6b.1
Other_nameCELE_Y46H3D.6Accession_evidenceNDBBX284605
Public_namenhr-237
DB_infoDatabaseAceViewgene5C104
WormQTLgeneWBGene00021610
WormFluxgeneWBGene00021610
NDBlocus_tagCELE_Y46H3D.6
PanthergeneCAEEL|WormBase=WBGene00021610|UniProtKB=Q966B8
familyPTHR46011
NCBIgene189970
RefSeqproteinNM_001313329.4
NM_071059.3
TrEMBLUniProtAccA0A0K3AW28
Q966B8
UniProt_GCRPUniProtAccQ966B8
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:04WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
222 Jul 2005 10:29:12WBPerson2970Name_changeCGC_namenhr-237
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
Allele (41)
StrainWBStrain00037071
RNASeq_FPKM (74)
GO_annotation (11)
Ortholog (50)
Paralog (217)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Expressed in nerve ring; pharynx; tail neurons; and ventral nerve cord.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY46H3D.6a
Y46H3D.6b
Corresponding_transcriptY46H3D.6a.1
Y46H3D.6b.1
Associated_featureWBsf978563
WBsf999373
WBsf233346
WBsf233347
Gene_product_binds (373)
Transcription_factorWBTranscriptionFactor001095
Experimental_infoRNAi_resultWBRNAi00020688Inferred_automaticallyRNAi_primary
WBRNAi00056720Inferred_automaticallyRNAi_primary
WBRNAi00037151Inferred_automaticallyRNAi_primary
Expr_patternExpr7716
Expr1024310
Expr1039453
Expr1160189
Expr1200076
Expr2014136
Expr2032376
Drives_constructWBCnstr00012861
WBCnstr00024483
Construct_productWBCnstr00016720
WBCnstr00024483
Microarray_results (17)
Expression_cluster (117)
InteractionWBInteraction000526871
WBInteraction000529364
WBInteraction000529677
WBInteraction000530624
WBInteraction000531867
Map_infoMapVPosition-17.8423Error0.006149
PositivePositive_cloneY46H3DInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00062515
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene