WormBase Tree Display for Gene: WBGene00021610
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WBGene00021610 | SMap | S_parent | Sequence | Y46H3D | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | nhr-237 | Person_evidence | WBPerson600 | |||||
Sequence_name | Y46H3D.6 | ||||||||
Molecular_name | Y46H3D.6a | ||||||||
Y46H3D.6a.1 | |||||||||
CE24323 | |||||||||
Y46H3D.6b | |||||||||
CE51016 | |||||||||
Y46H3D.6b.1 | |||||||||
Other_name | CELE_Y46H3D.6 | Accession_evidence | NDB | BX284605 | |||||
Public_name | nhr-237 | ||||||||
DB_info | Database | AceView | gene | 5C104 | |||||
WormQTL | gene | WBGene00021610 | |||||||
WormFlux | gene | WBGene00021610 | |||||||
NDB | locus_tag | CELE_Y46H3D.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00021610|UniProtKB=Q966B8 | |||||||
family | PTHR46011 | ||||||||
NCBI | gene | 189970 | |||||||
RefSeq | protein | NM_001313329.4 | |||||||
NM_071059.3 | |||||||||
TrEMBL | UniProtAcc | A0A0K3AW28 | |||||||
Q966B8 | |||||||||
UniProt_GCRP | UniProtAcc | Q966B8 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-237 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nhr | ||||||||
Allele (41) | |||||||||
Strain | WBStrain00037071 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (11) | |||||||||
Ortholog (50) | |||||||||
Paralog (217) | |||||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Expressed in nerve ring; pharynx; tail neurons; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y46H3D.6a | |||||||
Y46H3D.6b | |||||||||
Corresponding_transcript | Y46H3D.6a.1 | ||||||||
Y46H3D.6b.1 | |||||||||
Associated_feature | WBsf978563 | ||||||||
WBsf999373 | |||||||||
WBsf233346 | |||||||||
WBsf233347 | |||||||||
Gene_product_binds (373) | |||||||||
Transcription_factor | WBTranscriptionFactor001095 | ||||||||
Experimental_info | RNAi_result | WBRNAi00020688 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00056720 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00037151 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr7716 | ||||||||
Expr1024310 | |||||||||
Expr1039453 | |||||||||
Expr1160189 | |||||||||
Expr1200076 | |||||||||
Expr2014136 | |||||||||
Expr2032376 | |||||||||
Drives_construct | WBCnstr00012861 | ||||||||
WBCnstr00024483 | |||||||||
Construct_product | WBCnstr00016720 | ||||||||
WBCnstr00024483 | |||||||||
Microarray_results (17) | |||||||||
Expression_cluster (117) | |||||||||
Interaction | WBInteraction000526871 | ||||||||
WBInteraction000529364 | |||||||||
WBInteraction000529677 | |||||||||
WBInteraction000530624 | |||||||||
WBInteraction000531867 | |||||||||
Map_info | Map | V | Position | -17.8423 | Error | 0.006149 | |||
Positive | Positive_clone | Y46H3D | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00062515 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |