WormBase Tree Display for Gene: WBGene00021658
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| WBGene00021658 | SMap | S_parent | Sequence | Y48G1A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y48G1A.2 | |||||||
| Molecular_name | Y48G1A.2 | ||||||||
| Y48G1A.2.1 | |||||||||
| CE26998 | |||||||||
| Other_name | Y48G1A.g | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y48G1A.2 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | Y48G1A.2 | ||||||||
| DB_info | Database | AceView | gene | 1A821 | |||||
| WormQTL | gene | WBGene00021658 | |||||||
| WormFlux | gene | WBGene00021658 | |||||||
| NDB | locus_tag | CELE_Y48G1A.2 | |||||||
| NCBI | gene | 171625 | |||||||
| RefSeq | protein | NM_058320.5 | |||||||
| TrEMBL | UniProtAcc | Q9N3Q6 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N3Q6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (22) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP1997 | ||||||||
| Ortholog (18) | |||||||||
| Structured_description | Automated_description | Enriched in AFD; CEP socket cell; germ line; germline precursor cell; and head mesodermal cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including hydrogen sulfide; methylmercury hydroxide; and rotenone based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y48G1A.2 | |||||||
| Corresponding_transcript | Y48G1A.2.1 | ||||||||
| Other_sequence | CJC10400_1 | ||||||||
| CRC00181_1 | |||||||||
| CBC06530_1 | |||||||||
| CR02112 | |||||||||
| Associated_feature | WBsf643009 | ||||||||
| WBsf982474 | |||||||||
| WBsf982475 | |||||||||
| WBsf217122 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00004678 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056934 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000458 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022876 | ||||||||
| Expr1039481 | |||||||||
| Expr1160380 | |||||||||
| Expr2007678 | |||||||||
| Expr2025920 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (153) | |||||||||
| Map_info | Positive | Positive_clone | Y48G1A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -19.0669 | |||||||
| Method | Gene |
