WormBase Tree Display for Gene: WBGene00021690
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| WBGene00021690 | SMap | S_parent | Sequence | Y48G8AL | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y48G8AL.12 | |||||||
| Molecular_name | Y48G8AL.12 | ||||||||
| Y48G8AL.12.1 | |||||||||
| CE27271 | |||||||||
| Other_name | CELE_Y48G8AL.12 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | Y48G8AL.12 | ||||||||
| DB_info | Database | AceView | gene | 1B692 | |||||
| WormQTL | gene | WBGene00021690 | |||||||
| WormFlux | gene | WBGene00021690 | |||||||
| NDB | locus_tag | CELE_Y48G8AL.12 | |||||||
| NCBI | gene | 171698 | |||||||
| RefSeq | protein | NM_058434.6 | |||||||
| TrEMBL | UniProtAcc | Q9BL10 | |||||||
| UniProt_GCRP | UniProtAcc | Q9BL10 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (48) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00030584 | Caenorhabditis briggsae | From_analysis | OMA | |||||
| WBGene00030272 | Caenorhabditis briggsae | From_analysis | OMA | ||||||
| WBGene00056334 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00056333 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00143377 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| WBGene00146174 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| GCK72_002014 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| GCK72_002015 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| chrI_pilon.g172 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00195068 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Enriched in AFD; ASER; PLM; and hypodermis based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by ten chemicals including aldicarb; 1-methylnicotinamide; and nicotinic acid based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y48G8AL.12 | |||||||
| Corresponding_transcript | Y48G8AL.12.1 | ||||||||
| Other_sequence (16) | |||||||||
| Associated_feature | WBsf648934 | ||||||||
| WBsf655258 | |||||||||
| WBsf218961 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056963 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00007479 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024774 | ||||||||
| Expr1160412 | |||||||||
| Expr2007694 | |||||||||
| Expr2025936 | |||||||||
| Microarray_results | GPL14144_Y48G8AL.12_9-68_0.556_1_A | ||||||||
| GPL19516_CGZ0047261 | |||||||||
| GPL21109_Y48G8AL.12 | |||||||||
| GPL3518_CE27271 | |||||||||
| GPL8673_Y48G8AL_12P00015 | |||||||||
| Expression_cluster (159) | |||||||||
| Map_info | Positive | Positive_clone | Y48G8AL | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -16.4047 | |||||||
| Method | Gene |
