WormBase Tree Display for Gene: WBGene00021721
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| WBGene00021721 | SMap | S_parent | Sequence | Y49F6B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y49F6B.9 | |||||||
| Molecular_name | Y49F6B.9a | ||||||||
| Y49F6B.9a.1 | |||||||||
| CE41594 | |||||||||
| Y49F6B.9b | |||||||||
| CE41595 | |||||||||
| Y49F6B.9b.1 | |||||||||
| Other_name | Y49F6B.o | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y49F6B.9 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | Y49F6B.9 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (201) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (34) | |||||||||
| Paralog (11) | |||||||||
| Structured_description | Automated_description | Predicted to enable ubiquitin conjugating enzyme binding activity and ubiquitin protein ligase activity. Predicted to be involved in positive regulation of proteasomal ubiquitin-dependent protein catabolic process; protein polyubiquitination; and ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm. Predicted to be part of ubiquitin ligase complex. Is an ortholog of human RNF19A (ring finger protein 19A, RBR E3 ubiquitin protein ligase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y49F6B.9a | |||||||
| Y49F6B.9b | |||||||||
| Corresponding_CDS_history | Y49F6B.9:wp154 | ||||||||
| Y49F6B.9a:wp182 | |||||||||
| Y49F6B.9b:wp182 | |||||||||
| Corresponding_transcript | Y49F6B.9a.1 | ||||||||
| Y49F6B.9b.1 | |||||||||
| Other_sequence | MJ00842 | ||||||||
| SR05102 | |||||||||
| ACC10313_1 | |||||||||
| MAC02398_1 | |||||||||
| GO239888.1 | |||||||||
| ACC29029_1 | |||||||||
| EY471287.1 | |||||||||
| MA02810 | |||||||||
| MP01082 | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020792 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00020799 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00061928 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057044 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000441 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033292 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1029043 | ||||||||
| Expr1039516 | |||||||||
| Expr1160488 | |||||||||
| Expr2007723 | |||||||||
| Expr2025966 | |||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (130) | |||||||||
| Map_info | Positive | Positive_clone | Y49F6B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -6.25143 | |||||||
| Reference | WBPaper00055090 | ||||||||
| WBPaper00064898 | |||||||||
| Method | Gene |
