WormBase Tree Display for Gene: WBGene00021827
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| WBGene00021827 | SMap | S_parent | Sequence | Y54E10A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | dnc-6 | |||||||
| Sequence_name | Y54E10A.5 | ||||||||
| Molecular_name | Y54E10A.5 | ||||||||
| Y54E10A.5.1 | |||||||||
| CE34408 | |||||||||
| Other_name | CELE_Y54E10A.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | dnc-6 | ||||||||
| DB_info | Database | AceView | gene | 1D739 | |||||
| WormQTL | gene | WBGene00021827 | |||||||
| WormFlux | gene | WBGene00021827 | |||||||
| NDB | locus_tag | CELE_Y54E10A.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021827|UniProtKB=Q9N3F1 | |||||||
| family | PTHR13072 | ||||||||
| NCBI | gene | 171891 | |||||||
| RefSeq | protein | NM_058715.9 | |||||||
| SwissProt | UniProtAcc | Q9N3F1 | |||||||
| TREEFAM | TREEFAM_ID | TF352888 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N3F1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 18 Aug 2010 14:29:51 | WBPerson2970 | Name_change | CGC_name | dnc-6 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dnc | ||||||||
| Allele (78) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00093745 | ||||||||
| 00093746 | |||||||||
| 00093747 | |||||||||
| 00093748 | |||||||||
| 00093749 | |||||||||
| 00093750 | |||||||||
| 00093751 | |||||||||
| 00126027 | |||||||||
| Contained_in_operon | CEOP1088 | ||||||||
| Ortholog (32) | |||||||||
| Structured_description | Automated_description | Predicted to enable dynein complex binding activity. Predicted to be involved in mitotic spindle organization. Part of dynactin complex. Is an ortholog of human DCTN6 (dynactin subunit 6). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y54E10A.5 | |||||||
| Corresponding_CDS_history | Y54E10A.5:wp102 | ||||||||
| Corresponding_transcript | Y54E10A.5.1 | ||||||||
| Other_sequence | NBC00430_1 | ||||||||
| Acan_isotig14286 | |||||||||
| CBC15268_1 | |||||||||
| NB08041 | |||||||||
| MA02884 | |||||||||
| Associated_feature | WBsf643132 | ||||||||
| WBsf983077 | |||||||||
| WBsf217374 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00117110 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00037456 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025172 | ||||||||
| Expr1039574 | |||||||||
| Expr1160786 | |||||||||
| Expr2010983 | |||||||||
| Expr2029221 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (93) | |||||||||
| Interaction (12) | |||||||||
| Map_info | Map | I | Position | -4.47359 | Error | 0.00026 | |||
| Positive | Positive_clone | Y54E10A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00037699 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060970 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
