WormBase Tree Display for Gene: WBGene00021875
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| WBGene00021875 | SMap | S_parent | Sequence | Y54G2A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y54G2A.10 | |||||||
| Molecular_name | Y54G2A.10a | ||||||||
| Y54G2A.10a.1 | |||||||||
| CE27482 | |||||||||
| Y54G2A.10b | |||||||||
| CE33883 | |||||||||
| Y54G2A.10b.1 | |||||||||
| Y54G2A.10b.2 | |||||||||
| Other_name | CELE_Y54G2A.10 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | Y54G2A.10 | ||||||||
| DB_info | Database | AceView | gene | 4D565 | |||||
| WormQTL | gene | WBGene00021875 | |||||||
| WormFlux | gene | WBGene00021875 | |||||||
| NDB | locus_tag | CELE_Y54G2A.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021875|UniProtKB=Q95XX7 | |||||||
| family | PTHR36946 | ||||||||
| NCBI | gene | 177060 | |||||||
| RefSeq | protein | NM_001392271.1 | |||||||
| NM_001028315.5 | |||||||||
| TREEFAM | TREEFAM_ID | TF316964 | |||||||
| TrEMBL | UniProtAcc | Q86FN9 | |||||||
| Q95XX7 | |||||||||
| UniProt_GCRP | UniProtAcc | Q95XX7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (31) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (22) | |||||||||
| Paralog (11) | |||||||||
| Structured_description | Automated_description | Enriched in amphid sheath cell; head mesodermal cell; intestine; and neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twelve chemicals including Ethanol; Rifampin; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y54G2A.10a | |||||||
| Y54G2A.10b | |||||||||
| Corresponding_transcript | Y54G2A.10a.1 | ||||||||
| Y54G2A.10b.1 | |||||||||
| Y54G2A.10b.2 | |||||||||
| Associated_feature | WBsf995778 | ||||||||
| WBsf995779 | |||||||||
| WBsf1016951 | |||||||||
| WBsf1016952 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00000849 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057437 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014889 | ||||||||
| Expr1160873 | |||||||||
| Expr2007931 | |||||||||
| Expr2026173 | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (180) | |||||||||
| Map_info | Positive | Positive_clone | Y54G2A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -6.73942 | |||||||
| Method | Gene |
