WormBase Tree Display for Gene: WBGene00021879

WBGene00021879 SMap: S_parent: Sequence: Y54G2A
  Identity: Version: 2
    Name: CGC_name: clec-83 Person_evidence: WBPerson261
            WBPerson655
      Sequence_name: Y54G2A.14
      Molecular_name: Y54G2A.14
        Y54G2A.14.1
        CE39862
        Y54G2A.14.2
      Other_name: Y54G2A.x Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_Y54G2A.14 Accession_evidence: NDB BX284604
      Public_name: clec-83
    DB_info: Database: AceView gene 4D604
        WormQTL gene WBGene00021879
        WormFlux gene WBGene00021879
        NDB locus_tag CELE_Y54G2A.14
        Panther gene CAEEL|WormBase=WBGene00021879|UniProtKB=Q9N3B9
          family PTHR23062
        NCBI gene 177065
        RefSeq protein NM_067859.11
        TREEFAM TREEFAM_ID TF317818
        TrEMBL UniProtAcc Q9N3B9
        UniProt_GCRP UniProtAcc Q9N3B9
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:05 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 28 Sep 2005 17:40:12 WBPerson2970 Name_change: CGC_name: clec-83
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    Allele (60)
    RNASeq_FPKM (74)
    Ortholog (28)
    Paralog (39)
    Structured_description: Automated_description: Enriched in head mesodermal cell and intestine based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on RNA-seq; proteomic; and microarray studies. Is affected by fifteen chemicals including methylmercuric chloride; D-glucose; and Psoralens based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y54G2A.14
    Corresponding_CDS_history: Y54G2A.14:wp102
      Y54G2A.14:wp154
    Corresponding_transcript: Y54G2A.14.1
      Y54G2A.14.2
    Other_sequence: CJC08075_1
      CBC12022_1
    Associated_feature: WBsf651682
      WBsf995793
      WBsf1016965
  Experimental_info: RNAi_result: WBRNAi00057441 Inferred_automatically: RNAi_primary
      WBRNAi00037499 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021898
      Expr1039609
      Expr1160877
      Expr2010214
      Expr2028455
    Drives_construct: WBCnstr00024419
    Construct_product: WBCnstr00024419
    Microarray_results (17)
    Expression_cluster (188)
    Interaction: WBInteraction000552064
      WBInteraction000553285
  Map_info: Map: IV Position: -6.73097 Error: 0.000465
    Positive: Positive_clone: Y54G2A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031686
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene