WormBase Tree Display for Gene: WBGene00021943
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| WBGene00021943 | SMap | S_parent | Sequence | Y55F3BR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | Y55F3BR.6 | |||||||
| Molecular_name | Y55F3BR.6a | ||||||||
| Y55F3BR.6a.1 | |||||||||
| CE39864 | |||||||||
| Y55F3BR.6b | |||||||||
| CE51838 | |||||||||
| Y55F3BR.6a.2 | |||||||||
| Y55F3BR.6a.3 | |||||||||
| Y55F3BR.6b.1 | |||||||||
| Other_name | Y55F3BR.f | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| Y55F3BR.e | |||||||||
| CELE_Y55F3BR.6 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | Y55F3BR.6 | ||||||||
| DB_info | Database | AceView | gene | 4B586 | |||||
| WormQTL | gene | WBGene00021943 | |||||||
| WormFlux | gene | WBGene00021943 | |||||||
| NDB | locus_tag | CELE_Y55F3BR.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021943|UniProtKB=A0A1I6CMC9 | |||||||
| family | PTHR45640 | ||||||||
| NCBI | gene | 190317 | |||||||
| RefSeq | protein | NM_001380023.1 | |||||||
| NM_001380024.1 | |||||||||
| TrEMBL | UniProtAcc | Q9N350 | |||||||
| A0A1I6CMC9 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A1I6CMC9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 20 Oct 2016 10:55:05 | WBPerson4025 | Event | Acquires_merge | WBGene00021944 | ||||
| Acquires_merge | WBGene00021944 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (140) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00002537 | ||||||||
| 00002538 | |||||||||
| 00002539 | |||||||||
| 00002540 | |||||||||
| 00002541 | |||||||||
| Ortholog (29) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Predicted to enable unfolded protein binding activity. Predicted to be involved in protein refolding and response to heat. Predicted to be located in cytoplasm and nucleus. Expressed in body wall musculature. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y55F3BR.6a | |||||||
| Y55F3BR.6b | |||||||||
| Corresponding_CDS_history | Y55F3BR.6:wp105 | ||||||||
| Y55F3BR.6:wp154 | |||||||||
| Corresponding_transcript | Y55F3BR.6a.1 | ||||||||
| Y55F3BR.6a.2 | |||||||||
| Y55F3BR.6a.3 | |||||||||
| Y55F3BR.6b.1 | |||||||||
| Other_sequence | Dviv_isotig19687 | ||||||||
| CJC16862_1 | |||||||||
| MA03165 | |||||||||
| CJC04262_1 | |||||||||
| EX914359.1 | |||||||||
| Associated_feature | WBsf651631 | ||||||||
| WBsf667734 | |||||||||
| WBsf995279 | |||||||||
| WBsf995280 | |||||||||
| WBsf995281 | |||||||||
| WBsf1016619 | |||||||||
| WBsf229723 | |||||||||
| WBsf229724 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00021040 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00106391 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021041 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076829 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037528 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057548 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr15508 | ||||||||
| Expr1015790 | |||||||||
| Expr1017213 | |||||||||
| Expr1039653 | |||||||||
| Expr1160982 | |||||||||
| Expr1160983 | |||||||||
| Expr2007993 | |||||||||
| Expr2026235 | |||||||||
| Drives_construct | WBCnstr00042199 | ||||||||
| Construct_product | WBCnstr00042199 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (164) | |||||||||
| Interaction (12) | |||||||||
| Map_info | Positive | Positive_clone | Y55F3BR | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -23.2794 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00041771 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060685 | |||||||||
| Method | Gene |
