WormBase Tree Display for Gene: WBGene00021960
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| WBGene00021960 | SMap | S_parent | Sequence | Y57E12AM | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tmem-258 | Person_evidence | WBPerson622 | |||||
| Sequence_name | Y57E12AM.1 | ||||||||
| Molecular_name | Y57E12AM.1 | ||||||||
| Y57E12AM.1.1 | |||||||||
| CE26193 | |||||||||
| Other_name | CELE_Y57E12AM.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | tmem-258 | ||||||||
| DB_info | Database | AceView | gene | 5H543 | |||||
| WormQTL | gene | WBGene00021960 | |||||||
| WormFlux | gene | WBGene00021960 | |||||||
| NDB | locus_tag | CELE_Y57E12AM.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021960|UniProtKB=Q965T1 | |||||||
| family | PTHR13636 | ||||||||
| NCBI | gene | 179094 | |||||||
| RefSeq | protein | NM_072393.7 | |||||||
| SwissProt | UniProtAcc | Q965T1 | |||||||
| TREEFAM | TREEFAM_ID | TF300295 | |||||||
| UniProt_GCRP | UniProtAcc | Q965T1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 13 Mar 2019 16:36:24 | WBPerson1983 | Name_change | CGC_name | tmem-258 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tmem | ||||||||
| Allele (18) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00090640 | ||||||||
| 00090641 | |||||||||
| 00090642 | |||||||||
| 00090643 | |||||||||
| 00090644 | |||||||||
| 00090645 | |||||||||
| 00090646 | |||||||||
| 00126149 | |||||||||
| 00126150 | |||||||||
| Contained_in_operon | CEOP5534 | ||||||||
| Ortholog (31) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in protein N-linked glycosylation. Predicted to be located in several cellular components, including cytoplasm; membrane; and membrane-bounded organelle. Predicted to be part of oligosaccharyltransferase I complex. Is an ortholog of human TMEM258 (transmembrane protein 258). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y57E12AM.1 | |||||||
| Corresponding_transcript | Y57E12AM.1.1 | ||||||||
| Other_sequence (39) | |||||||||
| Associated_feature | WBsf646914 | ||||||||
| WBsf231933 | |||||||||
| WBsf231934 | |||||||||
| Experimental_info | Expr_pattern | Expr1021813 | |||||||
| Expr1039661 | |||||||||
| Expr1161072 | |||||||||
| Expr2008036 | |||||||||
| Expr2026276 | |||||||||
| Drives_construct | WBCnstr00024388 | ||||||||
| Construct_product | WBCnstr00024388 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (68) | |||||||||
| Map_info | Positive | Positive_clone | Y57E12AM | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 0.506769 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059011 | |||||||||
| Method | Gene |
