WormBase Tree Display for Gene: WBGene00022004
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| WBGene00022004 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | npr-22 | Person_evidence | WBPerson260 | |||||
| WBPerson42 | |||||||||
| WBPerson11490 | |||||||||
| Sequence_name | Y59H11AL.1 | ||||||||
| Molecular_name | Y59H11AL.1a | ||||||||
| Y59H11AL.1a.1 | |||||||||
| CE31260 | |||||||||
| Y59H11AL.1b | |||||||||
| CE38456 | |||||||||
| Y59H11AL.1b.1 | |||||||||
| Other_name | Y59H11AL.a | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| luqr-1 | Person_evidence | WBPerson11490 | |||||||
| CELE_Y59H11AL.1 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | npr-22 | ||||||||
| DB_info | Database | AceView | gene | 4J325 | |||||
| WormQTL | gene | WBGene00022004 | |||||||
| WormFlux | gene | WBGene00022004 | |||||||
| NDB | locus_tag | CELE_Y59H11AL.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022004|UniProtKB=Q59E83 | |||||||
| family | PTHR24238 | ||||||||
| NCBI | gene | 190424 | |||||||
| RefSeq | protein | NM_001028370.5 | |||||||
| NM_001028369.4 | |||||||||
| SwissProt | UniProtAcc | Q59E83 | |||||||
| UniProt_GCRP | UniProtAcc | Q59E83 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Apr 2012 16:15:43 | WBPerson2970 | Name_change | CGC_name | npr-22 | ||||
| 3 | 13 Oct 2023 01:37:05 | WBPerson51134 | Name_change | CGC_name | npr-22 | ||||
| Other_name | luqr-1 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | npr | ||||||||
| Allele (59) | |||||||||
| Strain | WBStrain00032103 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (19) | |||||||||
| Ortholog (27) | |||||||||
| Paralog (25) | |||||||||
| Structured_description | Automated_description | Enables neuropeptide receptor activity. Involved in several processes, including determination of adult lifespan; negative regulation of feeding behavior; and positive regulation of egg-laying behavior. Predicted to be located in plasma membrane. Expressed in head muscle; intestine; neurons; and pharyngeal muscle cell. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y59H11AL.1a | |||||||
| Y59H11AL.1b | |||||||||
| Corresponding_CDS_history | Y59H11AL.1:wp141 | ||||||||
| Corresponding_transcript | Y59H11AL.1a.1 | ||||||||
| Y59H11AL.1b.1 | |||||||||
| Other_sequence | HBC19595_1 | ||||||||
| Oden_isotig16746 | |||||||||
| Oden_isotig16747 | |||||||||
| JO471840.1 | |||||||||
| EX014213.1 | |||||||||
| FC553186.1 | |||||||||
| ACC30674_1 | |||||||||
| JO474536.1 | |||||||||
| JI214751.1 | |||||||||
| Associated_feature | WBsf228702 | ||||||||
| WBsf228703 | |||||||||
| WBsf228704 | |||||||||
| WBsf228705 | |||||||||
| WBsf228706 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037638 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00073397 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057778 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057779 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr12802 | ||||||||
| Expr13255 | |||||||||
| Expr13411 | |||||||||
| Expr1016281 | |||||||||
| Expr1161210 | |||||||||
| Expr1200316 | |||||||||
| Expr2014408 | |||||||||
| Expr2032649 | |||||||||
| Drives_construct | WBCnstr00022667 | ||||||||
| WBCnstr00022672 | |||||||||
| WBCnstr00024369 | |||||||||
| WBCnstr00039448 | |||||||||
| Construct_product | WBCnstr00022672 | ||||||||
| WBCnstr00024369 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (91) | |||||||||
| Interaction | WBInteraction000559836 | ||||||||
| WBInteraction000559837 | |||||||||
| WBInteraction000559838 | |||||||||
| WBInteraction000559839 | |||||||||
| WBInteraction000559840 | |||||||||
| WBInteraction000559841 | |||||||||
| Map_info | Map | IV | Position | 3.90371 | |||||
| Positive | Positive_clone | Y59H11AL | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (15) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
