WormBase Tree Display for Gene: WBGene00022010
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| WBGene00022010 | SMap | S_parent | Sequence | Y59H11AR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | catp-7 | Person_evidence | WBPerson61 | |||||
| Sequence_name | Y59H11AR.2 | ||||||||
| Molecular_name | Y59H11AR.2a | ||||||||
| Y59H11AR.2a.1 | |||||||||
| CE29894 | |||||||||
| Y59H11AR.2b | |||||||||
| CE33894 | |||||||||
| Y59H11AR.2b.1 | |||||||||
| Other_name | CELE_Y59H11AR.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | catp-7 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 21 Oct 2008 09:57:23 | WBPerson2970 | Name_change | CGC_name | catp-7 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | catp | ||||||||
| Allele (97) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (23) | |||||||||
| Ortholog (55) | |||||||||
| Paralog (14) | |||||||||
| Structured_description | Automated_description | Predicted to enable ATPase-coupled monoatomic cation transmembrane transporter activity and polyamine transmembrane transporter activity. Predicted to be involved in intracellular calcium ion homeostasis and polyamine transmembrane transport. Predicted to be located in membrane. Expressed in several structures, including amphid neurons; excretory cell; gonad; spermatocyte; and vulva. Human ortholog(s) of this gene implicated in Kufor-Rakeb syndrome; hereditary spastic paraplegia 78; and primary pulmonary hypertension. Is an ortholog of human ATP13A3 (ATPase 13A3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0060556 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:30213) | ||||
| DOID:0112348 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:30213) | ||||||
| DOID:14330 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:30213) | ||||||
| DOID:14557 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:24113) | ||||||
| Molecular_info | Corresponding_CDS | Y59H11AR.2a | |||||||
| Y59H11AR.2b | |||||||||
| Corresponding_CDS_history | Y59H11AR.2c:wp242 | ||||||||
| Y59H11AR.2d:wp261 | |||||||||
| Corresponding_transcript | Y59H11AR.2a.1 | ||||||||
| Y59H11AR.2b.1 | |||||||||
| Other_sequence | CRC04141_1 | ||||||||
| CBC01481_1 | |||||||||
| Dviv_isotig19835 | |||||||||
| CR05575 | |||||||||
| FD516891.1 | |||||||||
| CJC07388_1 | |||||||||
| CSC01752_1 | |||||||||
| CBC05535_1 | |||||||||
| Associated_feature (12) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057786 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057785 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (12) | |||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (165) | |||||||||
| Interaction | WBInteraction000042218 | ||||||||
| WBInteraction000139568 | |||||||||
| WBInteraction000308312 | |||||||||
| WBInteraction000322966 | |||||||||
| WBInteraction000460522 | |||||||||
| WBInteraction000584657 | |||||||||
| Map_info | Map | IV | Position | 3.90546 | Error | 0.001202 | |||
| Positive | Positive_clone | Y59H11AR | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00053837 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060223 | |||||||||
| WBPaper00060660 | |||||||||
| WBPaper00061616 | |||||||||
| WBPaper00063155 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
