WormBase Tree Display for Gene: WBGene00022019
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| WBGene00022019 | SMap | S_parent | Sequence | Y61A9LA | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | sut-2 | Person_evidence | WBPerson1817 | |||||
| Sequence_name | Y61A9LA.8 | ||||||||
| Molecular_name | Y61A9LA.8a | ||||||||
| Y61A9LA.8a.1 | |||||||||
| CE31123 | |||||||||
| Y61A9LA.8b | |||||||||
| CE53460 | |||||||||
| Y61A9LA.8b.1 | |||||||||
| Other_name | Y61A9LA.e | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| Y61A9LA_72.a | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y61A9LA.8 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | sut-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 25 Feb 2009 16:01:02 | WBPerson9133 | Name_change | CGC_name | sut-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sut | ||||||||
| Allele (222) | |||||||||
| Possibly_affected_by | WBVar02158620 | ||||||||
| Component_of_genotype | WBGenotype00000071 | ||||||||
| WBGenotype00000072 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (20) | |||||||||
| Ortholog (39) | |||||||||
| Structured_description | Automated_description | Predicted to enable poly(A) binding activity. Predicted to be involved in negative regulation of mRNA polyadenylation and regulation of mRNA stability. Located in nucleus and perinuclear region of cytoplasm. Expressed in germ line; hypodermis; and intestine. Human ortholog(s) of this gene implicated in autosomal recessive intellectual developmental disorder 56. Is an ortholog of human ZC3H14 (zinc finger CCCH-type containing 14). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0081217 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:20509) | ||||
| Molecular_info | Corresponding_CDS | Y61A9LA.8a | |||||||
| Y61A9LA.8b | |||||||||
| Corresponding_transcript | Y61A9LA.8a.1 | ||||||||
| Y61A9LA.8b.1 | |||||||||
| Other_sequence (37) | |||||||||
| Associated_feature | WBsf233591 | ||||||||
| WBsf233592 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057831 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00021199 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021204 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4062 | ||||||||
| Expr8604 | |||||||||
| Expr8605 | |||||||||
| Expr1021695 | |||||||||
| Expr1039674 | |||||||||
| Expr1161268 | |||||||||
| Expr2017141 | |||||||||
| Expr2035277 | |||||||||
| Drives_construct | WBCnstr00013397 | ||||||||
| Construct_product | WBCnstr00013397 | ||||||||
| Antibody | WBAntibody00001740 | ||||||||
| WBAntibody00003030 | |||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (105) | |||||||||
| Interaction (31) | |||||||||
| Map_info | Map | V | Position | -4.9988 | Error | 0.03909 | |||
| Positive | Positive_clone | Y61A9LA | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (16) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
