WormBase Tree Display for Gene: WBGene00022124
expand all nodes | collapse all nodes | view schema
| WBGene00022124 | SMap | S_parent | Sequence | Y71F9AR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | supr-1 | Person_evidence | WBPerson293 | |||||
| Sequence_name | Y71F9AR.3 | ||||||||
| Molecular_name | Y71F9AR.3 | ||||||||
| Y71F9AR.3.1 | |||||||||
| CE26245 | |||||||||
| Other_name | Y54E10BL.f | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y71F9AR.3 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | supr-1 | ||||||||
| DB_info | Database | AceView | gene | 1D554 | |||||
| WormQTL | gene | WBGene00022124 | |||||||
| WormFlux | gene | WBGene00022124 | |||||||
| NDB | locus_tag | CELE_Y71F9AR.3 | |||||||
| NCBI | gene | 171869 | |||||||
| RefSeq | protein | NM_058682.4 | |||||||
| TREEFAM | TREEFAM_ID | TF343359 | |||||||
| TrEMBL | UniProtAcc | Q95XT1 | |||||||
| UniProt_GCRP | UniProtAcc | Q95XT1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 20 Jun 2014 14:09:26 | WBPerson2970 | Name_change | CGC_name | supr-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | supr | ||||||||
| Allele (226) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00089320 | ||||||||
| 00089321 | |||||||||
| 00089322 | |||||||||
| Contained_in_operon | CEOP1943 | ||||||||
| Ortholog (21) | |||||||||
| Paralog | WBGene00007672 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Structured_description | Automated_description | Located in axon; cytoplasm; and nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y71F9AR.3 | |||||||
| Corresponding_transcript | Y71F9AR.3.1 | ||||||||
| Other_sequence (11) | |||||||||
| Associated_feature | WBsf219083 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00058172 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00000794 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr14991 | ||||||||
| Expr1010888 | |||||||||
| Expr1039737 | |||||||||
| Expr1161590 | |||||||||
| Expr2017134 | |||||||||
| Expr2035270 | |||||||||
| Construct_product | WBCnstr00041865 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (104) | |||||||||
| Interaction | WBInteraction000564830 | ||||||||
| WBInteraction000571438 | |||||||||
| Map_info | Map | I | Position | -5.25954 | |||||
| Positive | Positive_clone | Y71F9AR | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00045690 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
