WormBase Tree Display for Gene: WBGene00022390

WBGene00022390 SMap: S_parent: Sequence: Y95B8A
  Identity: Version: 2
    Name: CGC_name: him-19 Paper_evidence: WBPaper00035595
          Person_evidence: WBPerson261
      Sequence_name: Y95B8A.11
      Molecular_name: Y95B8A.11a
        Y95B8A.11a.1
        CE41964
        Y95B8A.11b
        CE49212
        Y95B8A.11c
        CE49423
        Y95B8A.11b.1
        Y95B8A.11c.1
      Other_name: CELE_Y95B8A.11 Accession_evidence: NDB BX284601
      Public_name: him-19
    DB_info: Database: AceView gene 1B354
        WormQTL gene WBGene00022390
        WormFlux gene WBGene00022390
        NDB locus_tag CELE_Y95B8A.11
        NCBI gene 190809
        RefSeq protein NM_058388.5
            NM_001306262.2
            NM_001306263.3
        TrEMBL UniProtAcc V6CK14
            V6CLF9
            Q9N2V7
        UniProt_GCRP UniProtAcc Q9N2V7
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:05 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 04 Feb 2010 11:37:06 WBPerson2970 Name_change: CGC_name: him-19
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: him
    Allele (117)
    Strain: WBStrain00035461
      WBStrain00035462
    RNASeq_FPKM (74)
    GO_annotation: 00093308
      00093309
    Ortholog (20)
    Structured_description: Concise_description: him-19 encodes a novel protein conserved amongst nematodes that has some similarity to members of the DDX6 DEAD/H-box RNA helicase family; during meiosis, him-19 is required for proper homologue recognition, recombination, and synaptonemal complex formation with a greater requirement seen in the female versus male germ line as well as in older animals. Paper_evidence: WBPaper00035595
          Curator_confirmed: WBPerson1843
          Date_last_updated: 03 May 2010 00:00:00
      Automated_description: Involved in meiotic DNA double-strand break formation and regulation of synaptonemal complex assembly. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y95B8A.11a
      Y95B8A.11b
      Y95B8A.11c
    Corresponding_CDS_history: Y95B8A.11:wp102
      Y95B8A.11:wp175
      Y95B8A.11:wp185
    Corresponding_transcript: Y95B8A.11a.1
      Y95B8A.11b.1
      Y95B8A.11c.1
    Other_sequence: CJC08775_1
    Associated_feature: WBsf648918
      WBsf982616
      WBsf982617
      WBsf1009158
      WBsf218940
      WBsf218941
  Experimental_info: RNAi_result: WBRNAi00082472 Inferred_automatically: RNAi_primary
      WBRNAi00004856 Inferred_automatically: RNAi_primary
      WBRNAi00058664 Inferred_automatically: RNAi_primary
      WBRNAi00037922 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1014735
      Expr1162085
      Expr2012426
      Expr2030662
    Microarray_results (22)
    Expression_cluster (115)
    Interaction: WBInteraction000578932
  Map_info: Map: I Position: -17.9394 Error: 0.057516
    Positive: Positive_clone: Y95B8A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00035595
    WBPaper00037842
    WBPaper00062498
    WBPaper00064333
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene