WormBase Tree Display for Gene: WBGene00022482
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WBGene00022482 | SMap | S_parent | Sequence | Y119D3B | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | fbxa-208 | Person_evidence | WBPerson655 | |||
Sequence_name | Y119D3B.4 | ||||||
Molecular_name | Y119D3B.4 | ||||||
Y119D3B.4.1 | |||||||
CE27462 | |||||||
Other_name | CELE_Y119D3B.4 | Accession_evidence | NDB | BX284603 | |||
Public_name | fbxa-208 | ||||||
DB_info | Database | AceView | gene | 3C347 | |||
WormQTL | gene | WBGene00022482 | |||||
WormFlux | gene | WBGene00022482 | |||||
NDB | locus_tag | CELE_Y119D3B.4 | |||||
Panther | gene | CAEEL|WormBase=WBGene00022482|UniProtKB=Q95Y61 | |||||
family | PTHR23015 | ||||||
NCBI | gene | 191038 | |||||
RefSeq | protein | NM_064958.2 | |||||
TrEMBL | UniProtAcc | Q95Y61 | |||||
UniProt_GCRP | UniProtAcc | Q95Y61 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | fbxa | ||||||
Allele (43) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | chrIII_pilon.g6907 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Paralog (211) | |||||||
Structured_description | Automated_description | Is affected by several genes including daf-16; dpy-10; and dcr-1 based on microarray and RNA-seq studies. Is affected by six chemicals including silicon dioxide nanoparticle; Cry5B; and Hydrolyzable Tannins based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF38/FTH, Caenorhabditis species and FTH domain. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y119D3B.4 | |||||
Corresponding_transcript | Y119D3B.4.1 | ||||||
Associated_feature | WBsf991262 | ||||||
WBsf1014206 | |||||||
WBsf224442 | |||||||
Experimental_info | RNAi_result (15) | ||||||
Expr_pattern | Expr1016038 | ||||||
Expr1159023 | |||||||
Drives_construct | WBCnstr00024211 | ||||||
Construct_product | WBCnstr00024211 | ||||||
Microarray_results (11) | |||||||
Expression_cluster (48) | |||||||
Map_info | Map | III | Position | -22.5747 | |||
Positive | Positive_clone | Y119D3B | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
[200225 pad] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (-22.5747) | |||||||
[200811 gw3] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (-22.5753) | |||||||
Method | Gene |