WormBase Tree Display for Gene: WBGene00022546
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WBGene00022546 | SMap | S_parent | Sequence | ZC196 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | ZC196.2 | |||||||
Molecular_name | ZC196.2 | ||||||||
ZC196.2.1 | |||||||||
CE47685 | |||||||||
Other_name | CELE_ZC196.2 | Accession_evidence | NDB | BX284605 | |||||
Public_name | ZC196.2 | ||||||||
DB_info | Database | AceView | gene | 5J215 | |||||
WormQTL | gene | WBGene00022546 | |||||||
WormFlux | gene | WBGene00022546 | |||||||
NDB | locus_tag | CELE_ZC196.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00022546|UniProtKB=O01630 | |||||||
family | PTHR10809 | ||||||||
NCBI | gene | 191101 | |||||||
RefSeq | protein | NM_072850.4 | |||||||
TrEMBL | UniProtAcc | O01630 | |||||||
UniProt_GCRP | UniProtAcc | O01630 | |||||||
OMIM | gene | 605704 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (47) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00025179 | ||||||||
00025180 | |||||||||
00025181 | |||||||||
00025182 | |||||||||
00025183 | |||||||||
00025184 | |||||||||
Ortholog (34) | |||||||||
Paralog (42) | |||||||||
Structured_description | Automated_description | Predicted to enable FFAT motif binding activity. Predicted to be involved in endoplasmic reticulum membrane organization and endoplasmic reticulum-plasma membrane tethering. Predicted to be located in endoplasmic reticulum membrane and plasma membrane. Human ortholog(s) of this gene implicated in amyotrophic lateral sclerosis type 8 and autosomal dominant adult-onset proximal spinal muscular atrophy. Is an ortholog of human VAPA (VAMP associated protein A) and VAPB (VAMP associated protein B and C). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:12377 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12649) | ||||
DOID:332 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12649) | ||||||
DOID:0111194 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12649) | ||||||
DOID:0050752 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12649) | ||||||
Molecular_info | Corresponding_CDS | ZC196.2 | |||||||
Corresponding_CDS_history | ZC196.2:wp231 | ||||||||
Corresponding_transcript | ZC196.2.1 | ||||||||
Associated_feature | WBsf718360 | ||||||||
WBsf232147 | |||||||||
Experimental_info | RNAi_result | WBRNAi00021596 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00037972 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00058771 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1022782 | ||||||||
Expr1162192 | |||||||||
Expr2008565 | |||||||||
Expr2026803 | |||||||||
Microarray_results (15) | |||||||||
Expression_cluster (160) | |||||||||
Interaction (22) | |||||||||
Map_info | Positive | Positive_clone | ZC196 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 1.58239 | |||||||
Method | Gene |