WormBase Tree Display for Gene: WBGene00022616
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| WBGene00022616 | SMap | S_parent | Sequence | ZC449 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | hsd-3 | Person_evidence | WBPerson2612 | |||||
| WBPerson370 | |||||||||
| Sequence_name | ZC449.6 | ||||||||
| Molecular_name | ZC449.6 | ||||||||
| ZC449.6.1 | |||||||||
| CE45184 | |||||||||
| Other_name | CELE_ZC449.6 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | hsd-3 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 27 Feb 2008 14:43:32 | WBPerson2970 | Name_change | CGC_name | hsd-3 | ||||
| Split_into | WBGene00045365 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hsd | ||||||||
| Allele (37) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00004491 | ||||||||
| 00004492 | |||||||||
| 00126655 | |||||||||
| 00126656 | |||||||||
| 00126657 | |||||||||
| Ortholog (43) | |||||||||
| Paralog (14) | |||||||||
| Structured_description | Automated_description | Predicted to enable oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor. Predicted to be involved in steroid biosynthetic process. Human ortholog(s) of this gene implicated in CHILD syndrome and CK syndrome. Is an ortholog of human SDR42E2 (short chain dehydrogenase/reductase family 42E, member 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111822 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:13398) | ||||
| DOID:0111898 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:13398) | ||||||
| Molecular_info | Corresponding_CDS | ZC449.6 | |||||||
| Corresponding_CDS_history | ZC449.6:wp174 | ||||||||
| ZC449.6:wp216 | |||||||||
| Corresponding_transcript | ZC449.6.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00092593 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00058930 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023286 | ||||||||
| Expr1162370 | |||||||||
| Expr2012608 | |||||||||
| Expr2030844 | |||||||||
| Drives_construct | WBCnstr00024107 | ||||||||
| Construct_product | WBCnstr00024107 | ||||||||
| Microarray_results | A_12_P152980 | ||||||||
| A_12_P152981 | |||||||||
| GPL13394_WBGene00022616 | |||||||||
| GPL13914_ZC449.6 | |||||||||
| GPL14144_ZC449.6_560-619_0.928_9_C | |||||||||
| GPL14144_ZC449.6_699-758_0.948_1_B | |||||||||
| GPL14144_ZC449.6_859-918_0.946_3_A | |||||||||
| GPL19516_CGZ0055903 | |||||||||
| GPL21109_ZC449.6 | |||||||||
| GPL8673_ZC449_6P00527 | |||||||||
| Expression_cluster (54) | |||||||||
| Interaction (20) | |||||||||
| Map_info | Map | X | Position | -6.19686 | Error | 0.000258 | |||
| Positive | Positive_clone | ZC449 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027258 | ||||||||
| WBPaper00032624 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00038935 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061385 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
