WormBase Tree Display for Gene: WBGene00022688
expand all nodes | collapse all nodes | view schema
| WBGene00022688 | SMap | S_parent | Sequence | ZK250 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | math-47 | Person_evidence | WBPerson655 | ||||||
| Sequence_name | ZK250.5 | |||||||||
| Molecular_name | ZK250.5 | |||||||||
| Other_name | CELE_ZK250.5 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | math-47 | |||||||||
| DB_info | Database | WormQTL | gene | WBGene00022688 | ||||||
| SignaLink | protein | WBGene00022688 | ||||||||
| WormFlux | gene | WBGene00022688 | ||||||||
| NDB | locus_tag | CELE_ZK250.5 | ||||||||
| NCBI | gene | 173560 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 12 Dec 2005 17:54:47 | WBPerson2970 | Name_change | CGC_name | math-47 | |||||
| 3 | 27 Sep 2013 09:37:38 | WBPerson1983 | Event | Split_into | WBGene00235352 | |||||
| Changed_class | CDS | Pseudogene | ||||||||
| Split_into | WBGene00235352 | |||||||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | math | |||||||||
| Allele (84) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog (17) | ||||||||||
| Paralog (16) | ||||||||||
| Structured_description | Automated_description | Is affected by several genes including daf-16; daf-2; and eat-2 based on microarray and RNA-seq studies. Is affected by six chemicals including metformin; Sirolimus; and Rifampin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | ZK250.5:wp94 | ||||||||
| ZK250.5:wp143 | ||||||||||
| ZK250.5b:wp239 | ||||||||||
| Corresponding_pseudogene | ZK250.5 | |||||||||
| Associated_feature | WBsf665375 | |||||||||
| WBsf665376 | ||||||||||
| WBsf665377 | ||||||||||
| WBsf222727 | ||||||||||
| WBsf222728 | ||||||||||
| Experimental_info | Expr_pattern | Expr1022875 | ||||||||
| Expr1040029 | ||||||||||
| Expr1162726 | ||||||||||
| Drives_construct | WBCnstr00024052 | |||||||||
| Construct_product | WBCnstr00024052 | |||||||||
| Microarray_results | 183995_s_at | |||||||||
| GPL19516_CGZ0056572 | ||||||||||
| GPL21109_ZK250.5 | ||||||||||
| Expression_cluster (62) | ||||||||||
| Interaction | WBInteraction000355450 | |||||||||
| WBInteraction000409704 | ||||||||||
| WBInteraction000430272 | ||||||||||
| Map_info | Map | II | Position | -14.1142 | Error | 0.004457 | ||||
| Positive | Positive_clone | ZK250 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00012854 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
