WormBase Tree Display for Gene: WBGene00022689
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| WBGene00022689 | SMap | S_parent | Sequence | ZK250 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | math-48 | Person_evidence | WBPerson655 | |||||
| Sequence_name | ZK250.6 | ||||||||
| Molecular_name | ZK250.6 | ||||||||
| ZK250.6.1 | |||||||||
| CE48600 | |||||||||
| Other_name | CELE_ZK250.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | math-48 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 17:54:47 | WBPerson2970 | Name_change | CGC_name | math-48 | ||||
| 3 | 27 Sep 2013 09:06:31 | WBPerson1983 | Event | Split_into | WBGene00235354 | ||||
| 4 | 27 Sep 2013 09:07:19 | WBPerson1983 | Event | Split_into | WBGene00235355 | ||||
| Split_into | WBGene00235354 | ||||||||
| WBGene00235355 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | math | ||||||||
| Allele (92) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Paralog (85) | |||||||||
| Structured_description | Automated_description | Enriched in male based on RNA-seq studies. Is affected by several genes including daf-2; hsf-1; and eat-2 based on microarray and RNA-seq studies. Is affected by methylmercuric chloride; Doxycycline; and paraquat based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; and TRAF-like. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK250.6 | |||||||
| Corresponding_CDS_history | ZK250.6:wp239 | ||||||||
| Corresponding_transcript | ZK250.6.1 | ||||||||
| Associated_feature | WBsf649904 | ||||||||
| WBsf986854 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00021928 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00103657 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012259 | ||||||||
| Expr1040030 | |||||||||
| Expr1162727 | |||||||||
| Expr2013419 | |||||||||
| Expr2031653 | |||||||||
| Drives_construct | WBCnstr00024051 | ||||||||
| Construct_product | WBCnstr00024051 | ||||||||
| Microarray_results | SMD_ZK250.6 | ||||||||
| SMD_ZK250.6:2 | |||||||||
| 183995_s_at | |||||||||
| GPL14144_ZK250.6_997-1056_0.832_59_A | |||||||||
| GPL19516_CGZ0056573 | |||||||||
| GPL21109_ZK250.6 | |||||||||
| GPL3518_CE28873 | |||||||||
| GPL8673_ZK250_6P01381 | |||||||||
| Expression_cluster (79) | |||||||||
| Interaction (17) | |||||||||
| Map_info | Map | II | Position | -14.104 | Error | 0.004197 | |||
| Positive | Positive_clone | ZK250 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
