WormBase Tree Display for Gene: WBGene00022694
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| WBGene00022694 | SMap | S_parent | Sequence | ZK328 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gcna-1 | Paper_evidence | WBPaper00050215 | |||||
| Sequence_name | ZK328.4 | ||||||||
| Molecular_name | ZK328.4 | ||||||||
| ZK328.4.1 | |||||||||
| CE28182 | |||||||||
| Other_name | CELE_ZK328.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | gcna-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 13 Jan 2017 19:24:29 | WBPerson2970 | Name_change | CGC_name | gcna-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gcna | ||||||||
| Allele (28) | |||||||||
| Possibly_affected_by | WBVar02153256 | ||||||||
| WBVar02153257 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (30) | |||||||||
| Structured_description | Automated_description | Enables SUMO polymer binding activity. Involved in meiotic chromosome segregation and protein-DNA covalent cross-linking repair. Located in PML body and condensed chromosome. Expressed in Z2; Z3; and germ cell. Human ortholog(s) of this gene implicated in spermatogenic failure. Is an ortholog of human GCNA (germ cell nuclear acidic peptidase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111910 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15805) | ||||
| Molecular_info | Corresponding_CDS | ZK328.4 | |||||||
| Corresponding_transcript | ZK328.4.1 | ||||||||
| Other_sequence | CJC02214_1 | ||||||||
| Oden_isotig20354 | |||||||||
| Tcol_isotig15618 | |||||||||
| CR00621 | |||||||||
| JI176048.1 | |||||||||
| JO470132.1 | |||||||||
| JI167881.1 | |||||||||
| CBC09199_1 | |||||||||
| CRC03853_1 | |||||||||
| Associated_feature | WBsf651097 | ||||||||
| WBsf226747 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00059337 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00077910 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021952 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007637 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005302 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13147 | ||||||||
| Expr14284 | |||||||||
| Expr15221 | |||||||||
| Expr15222 | |||||||||
| Expr1024823 | |||||||||
| Expr1040032 | |||||||||
| Expr1162767 | |||||||||
| Expr2011969 | |||||||||
| Expr2030206 | |||||||||
| Drives_construct | WBCnstr00024047 | ||||||||
| Construct_product | WBCnstr00024047 | ||||||||
| Antibody | WBAntibody00002727 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (156) | |||||||||
| Interaction (38) | |||||||||
| Map_info | Map | III | Position | -1.42734 | |||||
| Positive | Positive_clone | ZK328 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00050215 | |||||||||
| WBPaper00052018 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056476 | |||||||||
| WBPaper00057917 | |||||||||
| WBPaper00058968 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
