WormBase Tree Display for Gene: WBGene00022775
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| WBGene00022775 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | ZK616.5 | |||||||
| Molecular_name | ZK616.5 | ||||||||
| ZK616.5.1 | |||||||||
| CE27558 | |||||||||
| ZK616.5.2 | |||||||||
| Other_name | ZK616.f | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_ZK616.5 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | ZK616.5 | ||||||||
| DB_info | Database | AceView | gene | 4G157 | |||||
| WormQTL | gene | WBGene00022775 | |||||||
| WormFlux | gene | WBGene00022775 | |||||||
| NDB | locus_tag | CELE_ZK616.5 | |||||||
| NCBI | gene | 177323 | |||||||
| RefSeq | protein | NM_068399.4 | |||||||
| TREEFAM | TREEFAM_ID | TF322802 | |||||||
| TrEMBL | UniProtAcc | Q965Z2 | |||||||
| UniProt_GCRP | UniProtAcc | Q965Z2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (24) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | Csp11.Scaffold354.g869 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | |||||
| Sp34_40168000 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
| chrIV_pilon.g10435 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00022244 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in germ line; germline precursor cell; head mesodermal cell; hypodermis; and pharyngeal muscle cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; tiling array; and RNA-seq studies. Is affected by sixteen chemicals including rotenone; manganese chloride; and Alovudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK616.5 | |||||||
| Corresponding_transcript | ZK616.5.1 | ||||||||
| ZK616.5.2 | |||||||||
| Associated_feature | WBsf645970 | ||||||||
| WBsf977094 | |||||||||
| WBsf977095 | |||||||||
| WBsf977096 | |||||||||
| WBsf996494 | |||||||||
| WBsf996495 | |||||||||
| WBsf1017378 | |||||||||
| WBsf228301 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00116273 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00059552 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038365 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116272 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1040070 | ||||||||
| Expr1162968 | |||||||||
| Expr2008889 | |||||||||
| Expr2027123 | |||||||||
| Drives_construct | WBCnstr00023984 | ||||||||
| Construct_product | WBCnstr00023984 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (129) | |||||||||
| Map_info | Positive | Positive_clone | ZK616 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 1.64924 | |||||||
| Method | Gene |
