WormBase Tree Display for Gene: WBGene00023405
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WBGene00023405 | SMap | S_parent | Sequence | ZK1236 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | sor-1 | Person_evidence | WBPerson716 | |||||
Sequence_name | ZK1236.3 | ||||||||
Molecular_name | ZK1236.3a | ||||||||
ZK1236.3a.1 | |||||||||
CE54192 | |||||||||
ZK1236.3b | |||||||||
CE40223 | |||||||||
ZK1236.3b.1 | |||||||||
Other_name | phi-57 | Person_evidence | WBPerson2582 | ||||||
CELE_ZK1236.3 | Accession_evidence | NDB | BX284603 | ||||||
Public_name | sor-1 | ||||||||
DB_info | Database | WormQTL | gene | WBGene00023405 | |||||
WormFlux | gene | WBGene00023405 | |||||||
NDB | locus_tag | CELE_ZK1236.3 | |||||||
NCBI | gene | 176189 | |||||||
RefSeq | protein | NM_001379831.2 | |||||||
NM_001047429.2 | |||||||||
SwissProt | UniProtAcc | P34619 | |||||||
UniProt_GCRP | UniProtAcc | P34619 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 10 Jun 2004 10:09:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 17 Mar 2005 13:54:35 | WBPerson2970 | Name_change | Other_name | phi-57 | ||||
3 | 04 Apr 2006 10:01:40 | WBPerson2970 | Name_change | CGC_name | sor-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | sor | ||||||||
Allele (56) | |||||||||
Strain | WBStrain00008582 | ||||||||
WBStrain00008583 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00043549 | ||||||||
00043550 | |||||||||
00043551 | |||||||||
00043552 | |||||||||
00043553 | |||||||||
00043554 | |||||||||
00043555 | |||||||||
00043556 | |||||||||
00043557 | |||||||||
00043558 | |||||||||
Ortholog | WBGene00062966 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||
WBGene00191108 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||||
Csp11.Scaffold571.g4271 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
Sp34_30080700 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
chrIII_pilon.g8400 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00137583 | Caenorhabditis japonica | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Enables RNA binding activity. Involved in epigenetic regulation of gene expression. Located in nuclear speck. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | ZK1236.3a | |||||||
ZK1236.3b | |||||||||
Corresponding_CDS_history | ZK1236.3:wp157 | ||||||||
ZK1236.3a:wp275 | |||||||||
Corresponding_transcript | ZK1236.3a.1 | ||||||||
ZK1236.3b.1 | |||||||||
Associated_feature (11) | |||||||||
Experimental_info | RNAi_result (32) | ||||||||
Expr_pattern | Expr12373 | ||||||||
Expr12374 | |||||||||
Expr1017993 | |||||||||
Expr1040127 | |||||||||
Expr1162585 | |||||||||
Expr2016007 | |||||||||
Expr2034242 | |||||||||
Drives_construct | WBCnstr00020807 | ||||||||
WBCnstr00023885 | |||||||||
Construct_product | WBCnstr00020807 | ||||||||
WBCnstr00023885 | |||||||||
Antibody | WBAntibody00001062 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (110) | |||||||||
Interaction (56) | |||||||||
Map_info | Map | III | Position | -0.262167 | Error | 0.000476 | |||
Positive | Positive_clone | ZK1236 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 5685 | |||||||
5724 | |||||||||
Reference | WBPaper00025725 | ||||||||
WBPaper00027128 | |||||||||
WBPaper00031224 | |||||||||
WBPaper00031782 | |||||||||
WBPaper00038372 | |||||||||
WBPaper00061452 | |||||||||
Method | Gene |