WormBase Tree Display for Gene: WBGene00023407
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WBGene00023407 | Evidence | CGC_data_submission | |||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F56D1 | ||||||
Identity | Version | 2 | |||||||
Name | CGC_name | cex-1 | Person_evidence | WBPerson51 | |||||
Sequence_name | F56D1.6 | ||||||||
Molecular_name | F56D1.6 | ||||||||
F56D1.6.1 | |||||||||
CE01974 | |||||||||
Other_name | CELE_F56D1.6 | Accession_evidence | NDB | BX284602 | |||||
Public_name | cex-1 | ||||||||
DB_info | Database | AceView | gene | 2F739 | |||||
WormQTL | gene | WBGene00023407 | |||||||
WormFlux | gene | WBGene00023407 | |||||||
NDB | locus_tag | CELE_F56D1.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00023407|UniProtKB=Q10131 | |||||||
family | PTHR10827 | ||||||||
NCBI | gene | 186376 | |||||||
RefSeq | protein | NM_062633.2 | |||||||
SwissProt | UniProtAcc | Q10131 | |||||||
TREEFAM | TREEFAM_ID | TF315183 | |||||||
UniProt_GCRP | UniProtAcc | Q10131 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 14 Jun 2004 16:22:32 | WBPerson1971 | Event | Created | |||
2 | 16 Jul 2004 14:49:15 | WBPerson1971 | Event | Acquires_merge | WBGene00018962 | ||||
Acquires_merge | WBGene00018962 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | cex | ||||||||
Allele (18) | |||||||||
Strain | WBStrain00033003 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00056184 | ||||||||
Ortholog (24) | |||||||||
Paralog | WBGene00016965 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00017240 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00019760 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00023408 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
Structured_description | Automated_description | Predicted to enable metal ion binding activity. Expressed in RIML and RIMR. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F56D1.6 | |||||||
Corresponding_transcript | F56D1.6.1 | ||||||||
Other_sequence (12) | |||||||||
Associated_feature | WBsf987886 | ||||||||
WBsf987887 | |||||||||
WBsf1012230 | |||||||||
WBsf221281 | |||||||||
WBsf221282 | |||||||||
WBsf221283 | |||||||||
Experimental_info | RNAi_result | WBRNAi00032953 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00015809 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00048686 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr3903 | ||||||||
Expr6219 | |||||||||
Expr12131 | |||||||||
Expr12132 | |||||||||
Expr1026766 | |||||||||
Expr1040128 | |||||||||
Expr1152444 | |||||||||
Expr2009929 | |||||||||
Expr2028169 | |||||||||
Drives_construct | WBCnstr00003935 | ||||||||
WBCnstr00011736 | |||||||||
WBCnstr00020223 | |||||||||
WBCnstr00020231 | |||||||||
WBCnstr00020882 | |||||||||
WBCnstr00023884 | |||||||||
Construct_product | WBCnstr00023884 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (241) | |||||||||
Interaction (14) | |||||||||
Map_info | Map | II | Position | -1.48035 | Error | 0.016417 | |||
Positive | Positive_clone | F56D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00011325 | ||||||||
WBPaper00025315 | |||||||||
WBPaper00028268 | |||||||||
WBPaper00044578 | |||||||||
WBPaper00063813 | |||||||||
WBPaper00065331 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |