WormBase Tree Display for Gene: WBGene00023520
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WBGene00023520 | SMap | S_parent | Sequence | Y57G11C | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | oig-5 | Person_evidence | WBPerson260 | |||||
Sequence_name | Y57G11C.50 | ||||||||
Molecular_name | Y57G11C.50 | ||||||||
Y57G11C.50.1 | |||||||||
CE37441 | |||||||||
Other_name | CELE_Y57G11C.50 | Accession_evidence | NDB | BX284604 | |||||
Public_name | oig-5 | ||||||||
DB_info | Database | AceView | gene | 4P573 | |||||
WormFlux | gene | WBGene00023520 | |||||||
NDB | locus_tag | CELE_Y57G11C.50 | |||||||
NCBI | gene | 259604 | |||||||
RefSeq | protein | NM_001028363.5 | |||||||
TrEMBL | UniProtAcc | Q5WRK9 | |||||||
UniProt_GCRP | UniProtAcc | Q5WRK9 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 06 Sep 2004 16:21:57 | WBPerson1846 | Event | Created | |||
2 | 24 Feb 2012 15:34:46 | WBPerson2970 | Name_change | CGC_name | oig-5 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | oig | ||||||||
Allele (61) | |||||||||
Strain | WBStrain00037873 | ||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (15) | |||||||||
Paralog (19) | |||||||||
Structured_description | Automated_description | Enriched in interneuron; intestine; and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including eat-2; aak-2; and unc-30 based on RNA-seq and microarray studies. Is affected by six chemicals including multi-walled carbon nanotube; Psoralens; and allantoin based on RNA-seq studies. Is predicted to encode a protein with the following domains: Immunoglobulin-like fold; Immunoglobulin domain; and Immunoglobulin-like domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y57G11C.50 | |||||||
Corresponding_transcript | Y57G11C.50.1 | ||||||||
Associated_feature | WBsf998643 | ||||||||
WBsf229535 | |||||||||
Experimental_info | Expr_pattern | Expr1021505 | |||||||
Expr1161132 | |||||||||
Expr2014622 | |||||||||
Expr2032855 | |||||||||
Drives_construct | WBCnstr00023840 | ||||||||
Construct_product | WBCnstr00023840 | ||||||||
Microarray_results (12) | |||||||||
Expression_cluster (99) | |||||||||
Interaction | WBInteraction000553239 | ||||||||
Map_info | Map | IV | Position | 12.5194 | |||||
Positive | Positive_clone | Y57G11C | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |