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WormBase Tree Display for Gene: WBGene00023962

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Name Class

WBGene00023962SMapS_parentSequencecb25.fpc0011b
IdentityVersion2
NameCGC_nameCbr-fli-1From_analysisInferred_from_orthology
Sequence_nameCBG00589
Molecular_nameCBG00589a
CBG00589a.1
CBP39733
CBG00589b
CBP41229
CBG00589c
CBP42735
CBG00589b.1
CBG00589c.1
Other_nameCBG_00589Accession_evidenceNDBHE600982
Public_nameCbr-fli-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:53WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-fli-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfli
AlleleWBVar00003309
RNASeq_FPKMWBls:000000214.5692From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
15.0515From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
15.3501From_analysisRNASeq.briggsae.WBls:0000002.control_mean
16.4295From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
15.2648From_analysisRNASeq.briggsae.WBls:0000002.control_median
15.3821From_analysisRNASeq.briggsae.WBls:0000002.control_mean
15.4781From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000321.9685From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
23.1047From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
24.2409From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
19.5894From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
21.9329From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000421.7237From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
24.0317From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
26.3397From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
23.6612From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
23.7784From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
24.5338From_analysisRNASeq.briggsae.WBls:0000004.control_mean
27.1662From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:000002411.3213From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
11.5013From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
12.0525From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
12.6913From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
13.0776From_analysisRNASeq.briggsae.WBls:0000024.control_median
13.376From_analysisRNASeq.briggsae.WBls:0000024.control_mean
13.4639From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
16.0276From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
8.18548From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
10.4474From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
10.4619From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
9.47608From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
WBls:00000270.65114From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
21.4386From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.84244From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
8.31073From_analysisRNASeq.briggsae.WBls:0000027.control_mean
13.3749From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
8.10867From_analysisRNASeq.briggsae.WBls:0000027.control_median
9.57677From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003511.2835From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.9211From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
12.1171From_analysisRNASeq.briggsae.WBls:0000038.control_mean
12.1461From_analysisRNASeq.briggsae.WBls:0000038.control_median
13.3712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
21.561From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.61523From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004122.8789From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
29.7176From_analysisRNASeq.briggsae.WBls:0000041.control_mean
31.7792From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
31.9317From_analysisRNASeq.briggsae.WBls:0000041.control_median
32.0843From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
32.128From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
25.0181From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
26.8604From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
28.4582From_analysisRNASeq.briggsae.WBls:0000041.control_mean
29.3198From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006315.3916From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
15.8934From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
16.6351From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
18.13From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
18.8185From_analysisRNASeq.briggsae.WBls:0000063.control_mean
28.0423From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
15.9877From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
16.3114From_analysisRNASeq.briggsae.WBls:0000063.control_median
18.3467From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010116.0276From_analysisRNASeq.briggsae.total_over_all_stages.control_median
16.9474From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
16.5323From_analysisRNASeq.briggsae.total_over_all_stages.control_median
17.9576From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00127295
OrthologWBGene00001443Caenorhabditis elegansFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00070705Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00150119Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00137127Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
CBOVI.g5602Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g6771Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g8272Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g8274Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g10349Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15375Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25327Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1198Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g15742Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g4647Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g1448Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00419.g10588Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_11213.g23109Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-fli-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g19560Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01285.g19858Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_18412Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_21701Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_008620Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08025Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g7377Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30285600Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00228477Brugia malayiFrom_analysisWormBase-Compara
chrIII_pilon.g8447Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00245751Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00107461Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00259481Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00297289Trichuris murisFrom_analysisWormBase-Compara
WBGene00299603Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00026715Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038533Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable actin filament binding activity. Is an ortholog of C. elegans fli-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG00589a
CBG00589b
CBG00589c
Corresponding_CDS_historyCBG00589:bp194
CBG00589:bp255
Corresponding_transcriptCBG00589a.1
CBG00589b.1
CBG00589c.1
Other_sequenceJI164314.1
EG025790.1
MHC04642_1
FC546934.1
SRC00221_1
Tcol_isotig01029
MH00162
JI477231.1
FC549902.1
Oden_isotig19625
Tcol_isotig01026
HGC03554_1
Hbac_isotig02418
BXC04562_1
HG08667
JI483114.1
Dviv_isotig34678
Dviv_isotig24725
BE132483.1
Tcol_isotig01028
Oden_isotig20939
BMC08007_1
Tcir_isotig02760
FC811643.1
ACC11155_1
FC539854.1
TMC01209_1
FC544571.1
MH07843
Acan_isotig09625
OVC06302_1
MHC02045_1
HG03934
SSC03336_1
AYC02189_1
SS03359
HBC27380_1
GR13763
Acan_isotig14296
MH04635
TM01527
FC550711.1
Tcir_isotig02761
GRC03003_1
FC817209.1
AE03940
Tcol_isotig01027
SRC01551_1
JI471799.1
MHC00229_1
Experimental_infoExpr_patternExpr1065733
Microarray_resultsGPL8303_CB6_WBGene00023962_A
GPL8303_CB6_WBGene00023962_B
GPL14143_CBG00589_2028-2087_0.781_36_A
GPL14143_CBG00589_3300-3359_0.789_18_B
GPL14143_CBG00589_3763-3822_0.800_5_C
MethodGene